Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0734 ATGTGCAGTTACTTTAGGCAAAGGATGGAGAATTATCAAGGAGATTTGGCTGACATAGTTCGAGCTAGCGGCAGCGGTGGGGCGCGCACCTCCGATGAGCCTGTTGCTGACTGGCAATTTCCAAGCGAGCCCATGATTTTTTCGCCGGTGGTAGATGAACCCTTGGATGACTTTGGCGATCCCTTCTCAAATATGCGAGATCCGCTTCTTCATGAGCTTGGCATAGCTGGTTCAGGCTTCTTCGGCAGCTCAAATTCAAGTGAGCTTACACAAACCAGTGGGGAGGACACAAGTAGCAACCTTGTTGGAGGCGGCGGTATGTTTGGTCAGAAAATTCTTGACGAGGACATGAAAAGGCCTTGCAATATCTTCTCAAGGATGCTTCAGATCTCGCCCAATGCTAGGATGCCGATCTCTCCATGCGAGTCCCAGATAGTTGCAGCTTCGCCGACGGGAATTAAGACTTCCGCCTTGGCTCCTAATGACATGATTAGTGGCAACAGCTCCAAAGGTTGCTTGATGGACAGTACTGCTTTGCAGATCTCGTCTCCACGAAATCCGGGTATCAAGAGAAGGAAGAGCCAGGCAAAGAAGGTGGTTTGTATTCCAGCTCCAGCAGCAGCAAACAGCAGGCCAAGTGGAGAAGTAGTTCCATCTGATCTCTGGGCGTGGAGGAAGTACGGTCAGAAGCCCATCAAAGGTTCTCCTTACCCAAGGGGCTATTACAGATGCAGTAGCTCAAAGGGTTGCTCGGCCAGGAAACAAGTGGAACGAAGCCGAACTGATCCAAACATGTTGGTCATCACCTACACTTCTGAACACAATCATCCGTGGCCAACGCAGAGAAATGCCCTTGCAGGCTCAACCAGATCTCAGCCATCAAAAAACAATGGAGCTTCAAAGAACTCGGGGAGCTGTCAGTCGACCCAGAAGGCAACAGGGTTGAAGGAAGAAAACAAAGAGAGCTATAACAACGATGACATGTCTCCTATTGTTGGTGGGAGTTCCACAACAGGTGCGTCTGTGAAAGAGGAGATGGGAAACGTTGAGAAGCAGCTAGAGATGGATGATAGTGAATTCAGTGAAGGGTTTCCAAGAAGCTACAAGCCTGCAATGCCGGACTCCAACCAGTCGGAGGACTTCTTCGCAGATTTAGGAGAAATAGAGGCTGACCCTCTAAATCTATTGTTCGCACAGGGATTCTCATCAGGAGATCATGAAGAGAGAGAAAGCAAGGCCTTGGATCCATTCAGTCTGTTTGATTGGACAGGGAACAACAGCAATACATCATTTGGAGAAGATAAGAGGGGTTTATAA 1317 0.489 MCSYFRQRMENYQGDLADIVRASGSGGARTSDEPVADWQFPSEPMIFSPVVDEPLDDFGDPFSNMRDPLLHELGIAGSGFFGSSNSSELTQTSGEDTSSNLVGGGGMFGQKILDEDMKRPCNIFSRMLQISPNARMPISPCESQIVAASPTGIKTSALAPNDMISGNSSKGCLMDSTALQISSPRNPGIKRRKSQAKKVVCIPAPAAANSRPSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNGASKNSGSCQSTQKATGLKEENKESYNNDDMSPIVGGSSTTGASVKEEMGNVEKQLEMDDSEFSEGFPRSYKPAMPDSNQSEDFFADLGEIEADPLNLLFAQGFSSGDHEERESKALDPFSLFDWTGNNSNTSFGEDKRGL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0734 438 Gene3D WRKY domain 192 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi10g0734 438 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 14 397 IPR044810 GO:0003700
Vvi10g0734 438 Pfam WRKY DNA -binding domain 220 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi10g0734 438 ProSiteProfiles WRKY domain profile. 213 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi10g0734 438 MobiDBLite consensus disorder prediction 325 340 - -
Vvi10g0734 438 FunFam probable WRKY transcription factor 14 192 272 - -
Vvi10g0734 438 SUPERFAMILY WRKY DNA-binding domain 216 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi10g0734 438 MobiDBLite consensus disorder prediction 270 313 - -
Vvi10g0734 438 SMART WRKY_cls 218 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi10g0734 438 MobiDBLite consensus disorder prediction 270 340 - -
Vvi10g0734 438 MobiDBLite consensus disorder prediction 352 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0734 Vvi-Chr10 10756427 10759619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0734 1 438 WRKY Transcription Factor Family AT1G30650 45.333 3.60e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vvi10g0734 WRKY 2.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0734 - - vvi:100250704 878.626