Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0731 ATGGATTCTGCAAGGAGCTGGTTTAAAAAATTTCATCCTAAAAAGGATAAAATGAGTTCTAACAAAGAGACAGACAATATGAAGGATTTGTATAAGCCTCCAGTGGATGAGGCTCCTTCAAATTCCACAAAAGAGAAGGTTGCTGCCGCAAAGCATTATATCGAGAATCATTACAAAGCACAAATGAAAAATCTGCAAGACAGAAAGGAGAGACGCTGGGTCTTGGAGAGGAAACTTGCTGATGCTGATGTATCTGAGGAAGAGCAAATCAATCTTCTGAAATATTTTGAGAGAAAGGAGACAGAGTATATGCGTATCCAAAGACATAAGATGGGTGTTGATGACTTTGAACTTTTGACCATTATAGGAAGAGGTGCCTTTGGAGAGGTGAGACTTTGCAGAGAAAAAACTACTGGCCATGTGTATGCCATGAAAAAGCTCAAGAAATCAGAGATGCTTCGGAGGGGCCAGGTGGAACATGTTAAAGCTGAACGGAATCTTCTTGCTGAGGTTGACAGTGCTTGCATTGTCAAGCTTTATTGCTCCTTTCAAGATCAAGAATTTTTATATCTTATAATGGAATATCTTCCGGGGGGTGACATGATGACGTTACTAATGCGCAAGGATACCTTGACTGAGGATGAGGCAAGGTTTTATGTTGGGCAGACAGTCCTTGCCATTGAGTCTATTCACAAGCACAACTACATCCACAGGGATATCAAGCCTGACAATTTATTGCTTGATCGTTATGGCCATATGAAACTTTCAGATTTTGGGTTGTGCAAACCCTTGGACTGTAGTAGTTTTCCCAATCTTAGTGAGAATGACTATGGAGTGGGAAAAAATATCAAACCTACATTAGACAGTGACAAACATTCTAACATGCCTTCTGCACCGAGGCGGACTCAGCAGGAACAATTATTACACTGGCAAAAGAACAGAAGAATGTTGGCTTATTCAACAGTTGGGACTCCCGACTACATTGCCCCAGAAGTACTGCTGAAGAAAGGATATGGAATGGAGTGTGATTGGTGGTCTCTTGGGGCAATTATGTATGAGATGCTTGTGGGATATCCACCTTTTTATTCTGAGGAACCAATGTCAACATGCAGAAAGATAGTAAATTGGAGAACACACTTGAAATTCCCTGAAGAGGCGAAGCTTTCTGCAGAGGCTAAAGATCTCATAAGCAGACTCCTGTGCAATGTGGCACACAGGCTAGGGACTAAAGGAGCACATGAAATCAAAGCACACCCATGGTTTAAAGGTATCCAATGGGAAAGCTTATATCAGATGGAAGCTGCTTTTGTACCAGAGGTTAATGATGAGTTAGACACACAGAACTTTGAGAAATTTGAAGAGTTGGGGACTACAGCTCAATCGTCATCAAGGTCAGGTCCCTGGAAGAAGATGCTTCCATCCAAGGATGTAAATTTCGTTGGTTATACATACAAGAATTTTGAAATTGTCAACGAGCATCATGTGCCTGGCATTGCTGAGTTAAAGAAAAAGACGAATAAACCGAGGAGGCCATCTATCAAGACACTGTTTGATACCCCTGATCCTCCTGATCAGCCTGTTCAGGGAAGCTTTATTAACCTTTTGCCTACTCAAGTGGAGGTCTCTGAAAGCCCTGAGCAATCACCTCAATCTAACAGACCGCCGAAATACCCACAAAGACCTATGCAAAGATGA 1695 0.4189 MDSARSWFKKFHPKKDKMSSNKETDNMKDLYKPPVDEAPSNSTKEKVAAAKHYIENHYKAQMKNLQDRKERRWVLERKLADADVSEEEQINLLKYFERKETEYMRIQRHKMGVDDFELLTIIGRGAFGEVRLCREKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSACIVKLYCSFQDQEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGQTVLAIESIHKHNYIHRDIKPDNLLLDRYGHMKLSDFGLCKPLDCSSFPNLSENDYGVGKNIKPTLDSDKHSNMPSAPRRTQQEQLLHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSEEPMSTCRKIVNWRTHLKFPEEAKLSAEAKDLISRLLCNVAHRLGTKGAHEIKAHPWFKGIQWESLYQMEAAFVPEVNDELDTQNFEKFEELGTTAQSSSRSGPWKKMLPSKDVNFVGYTYKNFEIVNEHHVPGIAELKKKTNKPRRPSIKTLFDTPDPPDQPVQGSFINLLPTQVEVSESPEQSPQSNRPPKYPQRPMQR* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0731 564 Gene3D Transferase(Phosphotransferase) domain 1 200 265 - -
Vvi10g0731 564 Gene3D Transferase(Phosphotransferase) domain 1 320 439 - -
Vvi10g0731 564 Gene3D Phosphorylase Kinase; domain 1 114 199 - -
Vvi10g0731 564 Gene3D Phosphorylase Kinase; domain 1 440 450 - -
Vvi10g0731 564 FunFam Non-specific serine/threonine protein kinase 87 199 - -
Vvi10g0731 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Vvi10g0731 564 SUPERFAMILY Protein kinase-like (PK-like) 98 473 IPR011009 -
Vvi10g0731 564 MobiDBLite consensus disorder prediction 530 550 - -
Vvi10g0731 564 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 466 - -
Vvi10g0731 564 FunFam Non-specific serine/threonine protein kinase 320 439 - -
Vvi10g0731 564 FunFam Non-specific serine/threonine protein kinase 200 267 - -
Vvi10g0731 564 MobiDBLite consensus disorder prediction 1 44 - -
Vvi10g0731 564 SMART serkin_6 116 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0731 564 Pfam Protein kinase C terminal domain 440 484 IPR017892 GO:0004674|GO:0005524|GO:0006468
Vvi10g0731 564 CDD STKc_NDR_like 114 485 - -
Vvi10g0731 564 CDD MobB_NDR_LATS-like 50 111 - -
Vvi10g0731 564 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Vvi10g0731 564 ProSiteProfiles AGC-kinase C-terminal domain profile. 422 494 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vvi10g0731 564 Pfam Protein kinase domain 117 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0731 564 MobiDBLite consensus disorder prediction 1 32 - -
Vvi10g0731 564 ProSiteProfiles Protein kinase domain profile. 116 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0731 564 SMART pkinase_C_6 422 486 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vvi10g0731 564 MobiDBLite consensus disorder prediction 500 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0731 Vvi-Chr10 10676776 10698335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0731 1 540 AGC Kinase Gene Family AT4G14350 74.632 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Vvi10g0731 Pkinase 2.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0731 K08790 - vvi:100244001 1153.66