Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi10g0676 | ATGAGGATGCTTCTGCAAGTGCTAGTATCAGTTCATCTCATCACAATCATCATCTCTTTCGTATTTATAGCACAGGAAGCAGGGGCATCTATGACCAAGCCTGGGTGCCCAGAGAAATGTGGGAATATTACCATTCCATATCCATTTGGCATGGGGAAAGGTTGTTACCTGAATAGAAATTTTGAGATCACATGCAACATGTCCTCCAATCCCCCTCGTCCTCTTCTCCTCCAAGAAGTTCAACTTTTGCAGATATCAGAAGACTATCTGCGCATCAACGATATTGTTCACCATAGCTGTTTTAATAAGCAATCAGGGAAGACGAATTCATCACATGTACCATATAACAGAACTCATCATTTCAGTTACTCACACACCCAGAATGAGTTCATAGCCATCGGGTGTGACATATTTGCTTATATCACTGAGGACAACAGTAAAACAAACGCAACTGGGTGTGCATCGCTTTGTAATACTGATGAAGACATCGCTACTGATTTTTCCTCTTCTGCTTGCTCTGGCATTGGTTGCTGCAGGACTTATCTCCAAACAGATATTTCACGGTTTTATCTGAAGATGCGTAGCATCAACATGATCACACCAATCTGGACCTCTCAACCATGTGGCCTTGCTTTCATTTCTGAGAGGAACTTCTCCATACGTCAATATTTTAACCTCTCTAGTAAATTTTTAGAGAGGAATTTGTATTTTGTTCCAGCAGTACTTGACTGGTCAGTTGGGGACGTCTCTTGCCCTGAGGCTATCAGAAGAAAAAACTATGCGTGTGGCCAGAATACGTACTGCCATAACTCCATCCAGGGCCAGGGGTATAAGTGTCACTGCTCTAAAGGCTACCAAGGGAACCCCTACCTTGCAAACGGCTGCCAAGATATTAATGAGTGCAACGACCCAGACGAAACTTTTTGCCTCAAGATAGCTCTTTGCACTAATGTCCCTGGCAGTTACTCGTGCACTTGCCCAACTGATTACCATGGAGATGGCAAGAAAGATGGAACTGGGTGCATACGTGGCAAGCATCCACATTTGCTATCATTGGTACTTTCTCTAGGTATAAAACTTTACCATTCTCCAACACCTAGCACTCGAATCCCCTTCTCTACACTAACTTTTGTGTCTGATGTAGGTGTGGGGATTACTGTTGTTCCCTTTATCCTAATTGCTACAAGCTTAAGGTTATACCGAGGACTTGAGAAAAGAGAGAAAAAGAAAATAAAACAGAAGTTCTTCAAGAAGAATGGAGGTCTGCTATTGCAACAGCAAATTTCTTCTAGCAAGGAAAGTGTAGAAAAAACAAAACTCTATTCGGTAGAAGAGTTGGAGAAAGCAACAGATGGTTTCAATTTAAGTCGAATCATTGGTAAGGGAGGCCTCGGCACAGTATACAAAGGGATGTTATCAGATGGAAGCATTGTAGCCATTAAGAAATCCAATACGGTTGATGAGAAGCAGTTAGACCAGTTCATTAATGAAGTTTTGATTCTTTCACAGATCAACCATAGGCACATAGTAAAACTATTAGGTTGTTGTCTGGAGACTGAAGTACCTTTGCTGGTTTATGAATATGTCTCTAATGGCCCCCTCTCCCACCATCTTCATGATGAGGGTCATGTATATAGAATATCTTGGAAAAATCGGCTGCGAATTGCAAGTGAAATTGCTGGAGCCCTTGCTTATTTGCACTCGCATGCTTCTACAGCCATCTGTCATAGAGATATCAAGTCTAGCAACATATTGTTGGATGAAAACCTCCGGGCTGTACTTTCTGACTTTGGACTCTCAAGGTCAATACCCCTTGACAAAACTCATTTAACTGCATTGGTACAAGGGACATTTGGTTACTTGGATCCTGATTATTTTCATTCAGGTCAATTGACTGATAAAAGTGATGTTTATGCCTTTGGTGTAGTCCTTGCTGAACTTCTGACAGGAGAAAAAGCCATTTCCTTTGATAGATTTGAACAAGGTCTAGCAAGTCATTTTAGATCAGCAATGAAACAAAATCATCTGTTTGATATTCTTGATAACCAAGTTGTAAATGAAGGACAGAAGGATGATATTTTTGCTGTTGCAAAGCTTACTAAGAGATGCCTAAAGTTGAATGGGAAAAAAAGGCCAACCATGAAACAAGTTGAAATAGACCTCCAACAACTGGGCAGATTTCAGGAGCAGTTTTCTTGTCAGAAGTCAATGATTCAAGAGGATTTTTCACAACAGCAAACATGCCAGGACGACTGCACGGTAAGTGAAAGATCCCATTCCTACACATTTGGTCCAGCTACAGAAGAAATCGTTCAAGATATTGAGGTCTTGTTTTCGTAA | 2340 | 0.4111 | MRMLLQVLVSVHLITIIISFVFIAQEAGASMTKPGCPEKCGNITIPYPFGMGKGCYLNRNFEITCNMSSNPPRPLLLQEVQLLQISEDYLRINDIVHHSCFNKQSGKTNSSHVPYNRTHHFSYSHTQNEFIAIGCDIFAYITEDNSKTNATGCASLCNTDEDIATDFSSSACSGIGCCRTYLQTDISRFYLKMRSINMITPIWTSQPCGLAFISERNFSIRQYFNLSSKFLERNLYFVPAVLDWSVGDVSCPEAIRRKNYACGQNTYCHNSIQGQGYKCHCSKGYQGNPYLANGCQDINECNDPDETFCLKIALCTNVPGSYSCTCPTDYHGDGKKDGTGCIRGKHPHLLSLVLSLGIKLYHSPTPSTRIPFSTLTFVSDVGVGITVVPFILIATSLRLYRGLEKREKKKIKQKFFKKNGGLLLQQQISSSKESVEKTKLYSVEELEKATDGFNLSRIIGKGGLGTVYKGMLSDGSIVAIKKSNTVDEKQLDQFINEVLILSQINHRHIVKLLGCCLETEVPLLVYEYVSNGPLSHHLHDEGHVYRISWKNRLRIASEIAGALAYLHSHASTAICHRDIKSSNILLDENLRAVLSDFGLSRSIPLDKTHLTALVQGTFGYLDPDYFHSGQLTDKSDVYAFGVVLAELLTGEKAISFDRFEQGLASHFRSAMKQNHLFDILDNQVVNEGQKDDIFAVAKLTKRCLKLNGKKRPTMKQVEIDLQQLGRFQEQFSCQKSMIQEDFSQQQTCQDDCTVSERSHSYTFGPATEEIVQDIEVLFS* | 780 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi10g0676 | 779 | ProSitePatterns | Aspartic acid and asparagine hydroxylation site. | 315 | 326 | IPR000152 | - | |
Vvi10g0676 | 779 | SMART | serkin_6 | 453 | 727 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g0676 | 779 | SMART | egf_5 | 250 | 296 | IPR000742 | - | |
Vvi10g0676 | 779 | SMART | egf_5 | 300 | 342 | IPR000742 | - | |
Vvi10g0676 | 779 | Gene3D | Laminin | 251 | 299 | - | - | |
Vvi10g0676 | 779 | Gene3D | Phosphorylase Kinase; domain 1 | 417 | 528 | - | - | |
Vvi10g0676 | 779 | Pfam | Protein kinase domain | 454 | 717 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g0676 | 779 | CDD | EGF_CA | 297 | 333 | - | - | |
Vvi10g0676 | 779 | FunFam | Wall-associated receptor kinase 2 | 423 | 528 | - | - | |
Vvi10g0676 | 779 | ProSitePatterns | Calcium-binding EGF-like domain signature. | 297 | 324 | IPR018097 | GO:0005509 | |
Vvi10g0676 | 779 | Pfam | Calcium-binding EGF domain | 297 | 341 | IPR001881 | GO:0005509 | |
Vvi10g0676 | 779 | FunFam | Fibrillin 2 | 292 | 337 | - | - | |
Vvi10g0676 | 779 | FunFam | Wall-associated receptor kinase 2 | 529 | 744 | - | - | |
Vvi10g0676 | 779 | Gene3D | Laminin | 300 | 343 | - | - | |
Vvi10g0676 | 779 | SUPERFAMILY | Growth factor receptor domain | 261 | 752 | IPR009030 | - | |
Vvi10g0676 | 779 | SMART | egfca_6 | 297 | 342 | IPR001881 | GO:0005509 | |
Vvi10g0676 | 779 | CDD | STKc_IRAK | 459 | 724 | - | - | |
Vvi10g0676 | 779 | Gene3D | Transferase(Phosphotransferase) domain 1 | 529 | 750 | - | - | |
Vvi10g0676 | 779 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 574 | 586 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi10g0676 | 779 | ProSiteProfiles | EGF-like domain profile. | 297 | 333 | IPR000742 | - | |
Vvi10g0676 | 779 | ProSiteProfiles | Protein kinase domain profile. | 453 | 731 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g0676 | 779 | Pfam | Wall-associated receptor kinase galacturonan-binding | 36 | 89 | IPR025287 | GO:0030247 | |
Vvi10g0676 | 779 | SUPERFAMILY | Protein kinase-like (PK-like) | 431 | 721 | IPR011009 | - | |
Vvi10g0676 | 779 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 25 | 734 | IPR045274 | GO:0007166 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi10g0676 | Vvi-Chr10 | 9656452 | 9659202 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi10g0676 | 9 | 724 | Receptor kinase-like Gene Family | AT1G21230 | 40.137 | 4.46e-176 | 521 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Vvi10g0676 | Pkinase | 4.4e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi10g0676 | - | - | vvi:100245738 | 1496.87 |