Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0667 ATGGCCATGCAAGTAATAGTAGGTCATCTGGCCGCCATCATCATCATCATCTTGCTATTCTCATCGAAGGGAACAGCAGCGTCCATAGCCAAGCCTGGTTGCCGAGAGACATGTGGCAACGTCCGCATTGTTTATCCATTTGGTATTGGGAGAGGTTGCTACCATGACCGAAATTTTGAGGTCTCATGCGACAACTCCTCCAATCCTCCAAGGCCTTGTCTTGTGGTGATCGAAACTGAAGTTTTGCAAACGTCGCTGGACAATGTGAGAATTATTGATTGGGTTTCCCCTTCTTGTCATATCAGTTCCACAAAAGGAATGGGAATGGGTTTTTACTCGATGGAGCCTTATAGTTATTCCCACGCAGAAAATAAGTTTATAGGCATTGGGTGTGACATAGGTGTTTATATCGGTGAATTAAACATTACAAATCCTAGCCAAACAAGGTACGCCGGCGGGTGTGTGTCTGTTTGCCACATACCTGGAGGTCAACCCTGGTCTAATCGTACTTCCTGCTCTGGAATTAGTTGCTGCCAGACTACTTTCTCTAACGATCTTTCAAGCATTGATCTATGGGCTGTTAACATAAGCATCAGGTCGACCTCCAATCCATGTAGCTTTGCCATCATTGCCGAGAAGAACTTCTCGGACTTTGACCAATTTGACACCACTTTGTCCGGTGAAAACAAAACCTACTTTTACCCTGCAATATTGAATTGGGCAATCGGAAACAAGTCTTGCCAAGAAGCCCGAAAAAGAAGCGATTATGCATGTGGCAGCAACAGTCGTTGTGTTGATTCCGACAAAGGCAGTGGATATAAGTGTCGTTGCAGTCGAGGCTACCACGGGAACCCTTACCTTCGAGATGGCTGCATAGATATTGATGAGTGCATCGACTCAAACAACACTCTTTGCAAAAAGGGAGCTGCATGCATAAACACATATGGAGGCTTCTATTGTGCCTGCCCACCTGGTTACCACAGTTATGATAGCAAACCTGAACATGGGTGTGTACGTGACAAAGTAAAACTCAAGGCAGCCATTCTTGTTACCTCAGGAATAGGAATAACTGTTGTTCTTCTCATCCTACTTGCTGTTGGCTTCTGGTTGCATCGGCAACTTGAGGAAAGAAAGAAAAACAAACTCAAGCACAAGTTCTTCAAGAGGAATGGTGGTCTCCTATTGCAACAGCAAATCACTTCAAGTAGTAAAGGAAGTGTTGAGAAAACAAAACTCTTTGCCATAGAAGAGTTGGAGAAGGCAACAGACAACTTCAATGCAAGTCGAGTTCTTGGCAAGGGAGGTCATGGGACAGTGTATAAAGGGATGCTATTGGATGGAAGCATAGTAGCCATTAAGAAGTCAATCATAGTTGACGAGAGGCAAGTAGTTGAGTTTGTCAATGAAGTTTTCATTCTTTCACAGATTAACCATAGACACATAGTGAAGTTGTTAGGTTGCTGTCTAGAGAGCGAAGTTCCTTTACTAGTTTATGAATATGTGTCCAATAGCACTCTCTCTCATCATCTCCATGATAAGAACCGTGAATCAAAATTATCTTGGGAAAAGCGCCTCCGAATTGCTGATGAAATTGCAGGAGCCCTTGCTTATTTGCATTCCTATGCTTCTCCAGCCATCCTTCATAGGGATATCAAGTCCAGCAATATACTGTTAGATGAGCACTTTAGGGCTGTGGTTTCTGACTTTGGACTTTCCAGGTCAATAACCCATGAAAAAACACACTTGACCACATTAGTGCAGGGCACATTTGGTTACTTGGATCCAGAGTATTTTCGATCAGGCCAGTTTACGGATAAAAGTGATGTGTACGCCTTCGGGGTAGTGCTTGCTGAACTTTTGACAGGTGAAAAAGTCATTTGTTCTAGTAGATCTGAAGAAAGTCTAGCAACTCATTTTAGATTGGCAATGAAACAGAATTGCCTGTTTGAAATTCTGGACAAGGTAATCCTGGATGAAGGTCAGAAAGAGGAGATTCTTGCTGTTGCTAGGCTTACTAAGATATGCCTCAAGTTAGGTGGGAAGAAAAGGCCAACCATGAAAGAAATAGCAGCAGACCTCGACAGATTAAGGAGGACTGTGGAGCAGCAATCACTTCAACGGACTTGTCAGGACAACTCCTCTGTAAGTGTAAGGTCATATACTTATGCATCTACTAGTGCAGTTACAGAAGAGTATATACTTGAAGACGAGGACTATCCTAAACCATACCGCATGACTACTTAA 2244 0.4323 MAMQVIVGHLAAIIIIILLFSSKGTAASIAKPGCRETCGNVRIVYPFGIGRGCYHDRNFEVSCDNSSNPPRPCLVVIETEVLQTSLDNVRIIDWVSPSCHISSTKGMGMGFYSMEPYSYSHAENKFIGIGCDIGVYIGELNITNPSQTRYAGGCVSVCHIPGGQPWSNRTSCSGISCCQTTFSNDLSSIDLWAVNISIRSTSNPCSFAIIAEKNFSDFDQFDTTLSGENKTYFYPAILNWAIGNKSCQEARKRSDYACGSNSRCVDSDKGSGYKCRCSRGYHGNPYLRDGCIDIDECIDSNNTLCKKGAACINTYGGFYCACPPGYHSYDSKPEHGCVRDKVKLKAAILVTSGIGITVVLLILLAVGFWLHRQLEERKKNKLKHKFFKRNGGLLLQQQITSSSKGSVEKTKLFAIEELEKATDNFNASRVLGKGGHGTVYKGMLLDGSIVAIKKSIIVDERQVVEFVNEVFILSQINHRHIVKLLGCCLESEVPLLVYEYVSNSTLSHHLHDKNRESKLSWEKRLRIADEIAGALAYLHSYASPAILHRDIKSSNILLDEHFRAVVSDFGLSRSITHEKTHLTTLVQGTFGYLDPEYFRSGQFTDKSDVYAFGVVLAELLTGEKVICSSRSEESLATHFRLAMKQNCLFEILDKVILDEGQKEEILAVARLTKICLKLGGKKRPTMKEIAADLDRLRRTVEQQSLQRTCQDNSSVSVRSYTYASTSAVTEEYILEDEDYPKPYRMTT* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0667 747 ProSiteProfiles Protein kinase domain profile. 425 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0667 747 Pfam Protein kinase domain 426 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0667 747 Coils Coil 686 706 - -
Vvi10g0667 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Vvi10g0667 747 CDD EGF_CA 293 327 - -
Vvi10g0667 747 SUPERFAMILY EGF/Laminin 292 330 - -
Vvi10g0667 747 FunFam Wall-associated receptor kinase 2 245 291 - -
Vvi10g0667 747 FunFam Os05g0270875 protein 614 715 - -
Vvi10g0667 747 Pfam Calcium-binding EGF domain 293 334 IPR001881 GO:0005509
Vvi10g0667 747 CDD STKc_IRAK 431 696 - -
Vvi10g0667 747 ProSitePatterns Calcium-binding EGF-like domain signature. 293 320 IPR018097 GO:0005509
Vvi10g0667 747 SUPERFAMILY Protein kinase-like (PK-like) 411 719 IPR011009 -
Vvi10g0667 747 Gene3D Phosphorylase Kinase; domain 1 395 500 - -
Vvi10g0667 747 ProSiteProfiles EGF-like domain profile. 293 332 IPR000742 -
Vvi10g0667 747 ProSitePatterns Protein kinases ATP-binding region signature. 431 454 IPR017441 GO:0005524
Vvi10g0667 747 Gene3D Laminin 296 334 - -
Vvi10g0667 747 SMART serkin_6 425 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0667 747 FunFam Histone-lysine N-methyltransferase 508 601 - -
Vvi10g0667 747 SMART egf_5 246 292 IPR000742 -
Vvi10g0667 747 SMART egf_5 296 338 IPR000742 -
Vvi10g0667 747 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 311 322 IPR000152 -
Vvi10g0667 747 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 701 IPR045274 GO:0007166
Vvi10g0667 747 FunFam Wall-associated receptor kinase 2 394 500 - -
Vvi10g0667 747 Gene3D Laminin 245 295 - -
Vvi10g0667 747 Pfam Wall-associated receptor kinase galacturonan-binding 34 88 IPR025287 GO:0030247
Vvi10g0667 747 FunFam Fibrillin 2 292 332 - -
Vvi10g0667 747 Gene3D Transferase(Phosphotransferase) domain 1 501 722 - -
Vvi10g0667 747 SMART egfca_6 293 338 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0667 Vvi-Chr10 9279043 9281720 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0667 12 703 Receptor kinase-like Gene Family AT1G21230 42.008 3.05e-179 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vvi10g0667 Pkinase 7.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0667 - - vvi:100266176 1494.95