Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0666 ATGCCTGAGAGATTTTTGGGTACTTGTATCGACTTCAAAGGACAAGATTATAAGCTGATACCATTTGGGGCCGGCCGGAGAATATGGCCAGGGATGAATCTTGGAGCTGTGACAGTAGAGCTTGCACTCGCTAATCTTCTTTACTCATTTGACTGGGAAATGCCTGCTGGCATGAAGATGGAAGATATAGATACCGATGCAAAACCTGGTCTTACCATGACAAAGAAAAATGATCTCTACCTTGTGGCTAGGAATTATATTTAA 264 0.4242 MPERFLGTCIDFKGQDYKLIPFGAGRRIWPGMNLGAVTVELALANLLYSFDWEMPAGMKMEDIDTDAKPGLTMTKKNDLYLVARNYI* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0666 87 PANTHER CYTOCHROME P450 71B11-RELATED 1 84 - -
Vvi10g0666 87 SUPERFAMILY Cytochrome P450 1 83 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0666 87 Pfam Cytochrome P450 1 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0666 87 Gene3D Cytochrome P450 1 85 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0666 Vvi-Chr10 9266386 9266649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0666 1 87 Cytochrome P450 AT3G26330 55.172 1.61e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0666 - - vri:117923083 184.111