Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0664 ATGGAGCCAAACAATACTCTTTGCAAGAAGGGAGCTTTTTGCATTAACACAAATGGTAGCTACTATTGCAACTGCCCACATGGTTACTTATACAGAGATGATGACAAAAATGAATATGAGTGTGCACGCAACAAAGGAAAACTCAAGGCAGCCGTTCTTGTTTCTTCAGCAGGAATAGGAATCGCTCTTGTTCTTATCATCCTACTTGTTATTGGCTTTTGGTTGCATCAAGAACTCGAGAAAAGAAAGAAAAACAAACTCAAGCAGAAGTTCTTCAAAAAGAATGGTGGTCTTCTTTTGCAGCAGCAAATCTCTTCAAGTAGTATAGAAAGTGTTGAGAAAACAAAGCTCTATACCATAGAAGAGTTGGAGAAGGCAACCGACAATTTCAATGCAAGTCGAGTTCTTGGAAAGGGGGGTCATGGTAAAGTATACAAAGGGATGCTATTGGATGGAAGCATAGTGGCCATTAAGAAGTCAATTATAGTAGATGAACGGCACGTAGTTGAGTTTGTCAATGAAGTTTTCATTCTTTCTCAGATTAACCATAGGCATATAGTGAAATTGTTAGGTTGTTGTCTAGAGAGTGAAGTTCCTTTGCTGGTTTATGAGAACGTCTCCAATAGCACTCTATCCCACCATCTCCATAATCAGGATCACGCATCAACATTGTCTTGGGAAAAGCGCTTGCGAATTGCAGATGAAATTGCAGGAGCCCTTGCTTATTTACATTCATATGCTTCTCCAGCTATCCTTCATAGGGATATCAAGTCTAGTAACATACTGTTGGATCAGAATTTTAGGGCTGTGGTTTCTGACTTTGGACTTTCAAGGCCAATAGCCAATGAAAAAACTCACCTGACCACATTAGTGCAAGGCACATTTGGTTACTTGGATCCAGAGTATTTTCGATCAGGTCAGTTTACAGACAAAAGTGATGTATATGCATTCGGGGTAGTTCTTGCTGAAATTCTAACGGGTGAAAAGGTCATTTCTTCAAGTAGAGTTGAAGAGAGTCTAGCAATTCATTTTAGATTGGCAATGAAACAGGATTGCCTGCTTGAAATTCTAGACAAGGTAATCGTGGATGAAGGTCCGAAAGTGGCAATTCCTGCTGTTGCTAACCTTGCTAAAAGATGCCTGAAGTTGAGTGGGAAGAAAAGGCCAACCATGAGAGAAATAGCAGCAGAACTTGACAAATTAAGGACTATGGAGAGTACATTACTACAGCAGACTTCCCTGGACAACTACACTGGAAGCGGAAGGTCCTATTCTTATGCATCTACTAGTGCAGTTACAGAAGAGTATGTCCTTCAAAACCAGGAGTTTCCTAGACCAGATAGCATGACTGCTTAA 1356 0.4041 MEPNNTLCKKGAFCINTNGSYYCNCPHGYLYRDDDKNEYECARNKGKLKAAVLVSSAGIGIALVLIILLVIGFWLHQELEKRKKNKLKQKFFKKNGGLLLQQQISSSSIESVEKTKLYTIEELEKATDNFNASRVLGKGGHGKVYKGMLLDGSIVAIKKSIIVDERHVVEFVNEVFILSQINHRHIVKLLGCCLESEVPLLVYENVSNSTLSHHLHNQDHASTLSWEKRLRIADEIAGALAYLHSYASPAILHRDIKSSNILLDQNFRAVVSDFGLSRPIANEKTHLTTLVQGTFGYLDPEYFRSGQFTDKSDVYAFGVVLAEILTGEKVISSSRVEESLAIHFRLAMKQDCLLEILDKVIVDEGPKVAIPAVANLAKRCLKLSGKKRPTMREIAAELDKLRTMESTLLQQTSLDNYTGSGRSYSYASTSAVTEEYVLQNQEFPRPDSMTA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0664 451 CDD EGF_CA 5 29 - -
Vvi10g0664 451 SMART serkin_6 130 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0664 451 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 11 405 IPR045274 GO:0007166
Vvi10g0664 451 FunFam Wall-associated receptor kinase 2 99 205 - -
Vvi10g0664 451 Pfam Protein kinase domain 131 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0664 451 FunFam Wall-associated receptor kinase 2 206 419 - -
Vvi10g0664 451 SUPERFAMILY Protein kinase-like (PK-like) 116 424 IPR011009 -
Vvi10g0664 451 SUPERFAMILY EGF/Laminin 8 37 - -
Vvi10g0664 451 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Vvi10g0664 451 Gene3D Transferase(Phosphotransferase) domain 1 206 420 - -
Vvi10g0664 451 CDD STKc_IRAK 136 401 - -
Vvi10g0664 451 Gene3D Phosphorylase Kinase; domain 1 94 204 - -
Vvi10g0664 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Vvi10g0664 451 Gene3D Laminin 3 44 - -
Vvi10g0664 451 Pfam EGF-like domain 3 29 IPR000742 -
Vvi10g0664 451 ProSiteProfiles Protein kinase domain profile. 130 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0664 Vvi-Chr10 9212622 9214062 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0664 39 410 Receptor kinase-like Gene Family AT1G19390 54.255 1.52e-130 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vvi10g0664 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0664 - - vvi:100257794 833.943