Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0640 ATGCTAAAGAAGCCTGCTCTGAAATCTTTATCATTCAATTACGCCTGGGCTCCTGAGGGAGCTGTTTTAATATGCTTCACATCAGGGACCACTGGAAGACCGAAGGGAGTAACAATAAGCCATTCAGCTTTAATTATACAATCTCTGGCAAAAATTGCCATTGTGGGTTATGATGAGGATGATGTCTATTTGCATACTGCTCCATTGTGCCATATTGGTGGTTTGTCATCTGCCTTGACCATGTTAATGGTAGGAGGTTGCCATATCTTTATACCAAAGTTTGATGCCAAATTGGCACTGGAAGCCATAAAGCAACACCATGTGACTTCTCTAATCACTGTCCCTGCAATAATGGTAGATTTAGTTTCCATAATCAGGATGAAGATGACCTGGAAAGTGACTGAAAGTGTAAAGAAGATACTAAATGGAGGTGGAGGTCTCTCTAATGGGCTTATTGAAGATGCTATCAAATTCTTCCCAAGAGCTAAGATTCTTTCAGCTTATGGAATGACAGAGACCTGTTCTTCACTGACATTCATGACCCTCTATGACCCAACATGTGCAAGCTCCAGGCAGGCTCTTCAAGAGTTTGTTGAAATAAAATCAAGTTCATTTCACCTGCCTGAAGGTGTTTGTGTCGGCAAGCCTGCTCCACATGTTGAATTAAAAATATGCTTTGATAGCTCAGATCATGTTGGAAGGATTTTAACCAGAGGCCCACACATAATGCTTAGATATTGGGATCAAATTTCATCAAGGCCATCAGATTCTCCTGATGAAGGTTGGCTAGATACAGGTGATATAGGGTCCATCGATGACTATGGTAATATATGGCTGATTGGACGAACAAACAATCGAATCAAGAGTGGAGGGGAGAACGTGTATCCTGAAGAGGTGGAGACCGTCCTATCACAACACCCAGGAGTCACTGGCAGTGTGGTTGTTGGACTTCCAGACGTTCGCTTGACAGAGATGGTTGTTGCTTGTATTCGAATAAAAGACAATTGGCAATGGGCTGATAATAGTCCTGTACATCCAACTGAAAAGAAAGAGCTAGTCTTATCCAGTGAAACCCTGCGGCACCATTGTAGAGAGAAGAATTTAACTGGATTTAAAATACCAAAACTTTTTACTTTATGGAGGAAGCCGTTCCCACTTACATCAACTGGAAAATTGAGAAGATACCAAGTTCAGAGAGAAGTTTTGTCCCACCTGCACTCCTTGCCTAGCAATCTTTGA 1239 0.4189 MLKKPALKSLSFNYAWAPEGAVLICFTSGTTGRPKGVTISHSALIIQSLAKIAIVGYDEDDVYLHTAPLCHIGGLSSALTMLMVGGCHIFIPKFDAKLALEAIKQHHVTSLITVPAIMVDLVSIIRMKMTWKVTESVKKILNGGGGLSNGLIEDAIKFFPRAKILSAYGMTETCSSLTFMTLYDPTCASSRQALQEFVEIKSSSFHLPEGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISSRPSDSPDEGWLDTGDIGSIDDYGNIWLIGRTNNRIKSGGENVYPEEVETVLSQHPGVTGSVVVGLPDVRLTEMVVACIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTGFKIPKLFTLWRKPFPLTSTGKLRRYQVQREVLSHLHSLPSNL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0640 412 PANTHER ACYL-COA SYNTHETASE 12 402 - -
Vvi10g0640 412 ProSitePatterns Putative AMP-binding domain signature. 24 35 IPR020845 -
Vvi10g0640 412 Pfam AMP-binding enzyme C-terminal domain 298 391 IPR025110 -
Vvi10g0640 412 SUPERFAMILY Acetyl-CoA synthetase-like 15 404 - -
Vvi10g0640 412 CDD AFD_class_I 23 393 - -
Vvi10g0640 412 Gene3D - 286 402 IPR045851 -
Vvi10g0640 412 Pfam AMP-binding enzyme 16 289 IPR000873 -
Vvi10g0640 412 Gene3D - 4 285 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0640 Vvi-Chr10 8829519 8833790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0640 17 316 Monolignol Biosynthesis Gene Families AT3G21240 33.013 6.32e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0640 K14760 - vvi:100250731 825.854