Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0637 ATGAAGATTTGTTTAGTCATAATGGTTTTTATCAATTTGCATATTGATGTGAGCAGAAGCAATGGAGATGATGATATCACAATGAGGATTCTTTACTGTGGGATTTGCCACACTGACCTCGGCATGCTTAGGAATCACCATGGAATCTCTCTCTACCCTCTTGTTCCTGGGCATGAAATTGTGGGGGTGGTGACCCAAGTGGGCTCCAAGGTACACAAGTTCAAGGTTGGAGACAAGGCAGGTGTGGGCACCATGATAGGCTCCTGTGGTGCATGCCAAAACTGCCAAGACGACTTGGAGAGCTACTGTCCCTCCATGACCACCACCTACACCATGTTTTCACCCGATGGAAGCATCAACTATGGAGGATTTTCTGATATTCTTGTGGTTAATGAGCACTTCGCCGTGCGTTTTCCGGACAACCTTTCACCAGAAGGTGGTGCACCGTTGCTTTGCGCCGGTATCACGGTCTATAGCCCCATGAAGCATTTTGGGCTGACTCAGCCAGGCATGCATCTGGGTGTGGTTGGGCTGGGTGGACTAGGGCATGTTGCAGTGAAGTTCGCTAAGGCATTTGGTATGAAAGTCACTGTGATTAGCACGTCCCTCGCGAAGAAGAATGCTGCTCTTGCTGAGCTAGGCGCTGATTCATTTTTAGTTAGCCATGATTCGGAGCAAATGCAGGCTGCACTCGGGACAATGGACGGCATCATCGACACTGTGTCTGCGCCCCATGCTTTGAAGCCTTTGATAGAACTATTGAAGCGGGATGGGAAGCTGATAATGTTGGGTGCACCAGACATGGAGAAGCCGACTGATTTGCCTCTCTATTCCTTGTTTGTTGGGAGGAAAGTGATATCAGCGAGCATGACAGGAGGAATGAGAGAAACACAAGAAATGATGGAGTTTGCAGGGAAGCACAACATAAGTGCAGATGTTGAAGTCATTTCAATGGCGGATGTGAACACAGCCATGGAGCGACTGACTAAAGGGGATGTCAAGTACCGTTTTGTCATTGACATTGCCAACTCCTTAGCTACTAATTAG 1047 0.4814 MKICLVIMVFINLHIDVSRSNGDDDITMRILYCGICHTDLGMLRNHHGISLYPLVPGHEIVGVVTQVGSKVHKFKVGDKAGVGTMIGSCGACQNCQDDLESYCPSMTTTYTMFSPDGSINYGGFSDILVVNEHFAVRFPDNLSPEGGAPLLCAGITVYSPMKHFGLTQPGMHLGVVGLGGLGHVAVKFAKAFGMKVTVISTSLAKKNAALAELGADSFLVSHDSEQMQAALGTMDGIIDTVSAPHALKPLIELLKRDGKLIMLGAPDMEKPTDLPLYSLFVGRKVISASMTGGMRETQEMMEFAGKHNISADVEVISMADVNTAMERLTKGDVKYRFVIDIANSLATN* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0637 348 SUPERFAMILY GroES-like 21 170 IPR011032 -
Vvi10g0637 348 PANTHER ALDEHYDE REDUCTASE 18 344 IPR047109 GO:0016616
Vvi10g0637 348 Gene3D - 153 311 - -
Vvi10g0637 348 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 57 71 IPR002328 GO:0008270|GO:0016491
Vvi10g0637 348 Gene3D - 19 341 - -
Vvi10g0637 348 SMART PKS_ER_names_mod 8 339 IPR020843 GO:0016491
Vvi10g0637 348 Pfam Alcohol dehydrogenase GroES-like domain 24 136 IPR013154 -
Vvi10g0637 348 Pfam Zinc-binding dehydrogenase 180 303 IPR013149 -
Vvi10g0637 348 CDD CAD1 19 340 IPR047109 GO:0016616
Vvi10g0637 348 FunFam Cinnamyl alcohol dehydrogenase 153 311 - -
Vvi10g0637 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 142 309 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0637 Vvi-Chr10 8804851 8806457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0637 19 345 Monolignol Biosynthesis Gene Families AT2G21730 59.574 1.65e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0637 - K23232 vvi:100243859 660.988