Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0621 ATGCAAACTCGTCCATCATTTATACCCATTTCTTTTACCTATCACCTTTCTCATTATCCAAATTCACATATCTATCATGTCACCACTCTAGCAGATGATGGGCCAGGATCACTTTGGATTGTCTTTGAAGTTTCAGGCATCATTCATCTCTCATCTTACCTAAAGGTCCTAAATTGGACTTCACTCTGCGTCTTGGCAATGAGAAATCTCGGTGCTGAATCCCTTTGCAGAGGTGACATCGCCTTCGGGTCCTTGTGGTTCTTCACCTACGTCGGAATCTATCGTTTCCTTGTCCCCTCCATCATATTATGA 312 0.4295 MQTRPSFIPISFTYHLSHYPNSHIYHVTTLADDGPGSLWIVFEVSGIIHLSSYLKVLNWTSLCVLAMRNLGAESLCRGDIAFGSLWFFTYVGIYRFLVPSIIL* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0621 103 Gene3D - 19 64 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0621 Vvi-Chr10 8514407 8520194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0621 21 62 Polysaccharide Lyase AT3G09540 50.000 6.25e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0621 K01728 - vvi:100255011 61.2326