Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0611 ATGAAAGATGCTACAGCAGCTGCAGCGATGACTAGTAGTGGAAGAGGAGGAGGAGGTGGTAGTGGTAGTGGTAGTGGAGAGAAGGTGCGAAGCGTGAGTGATAAGGAGAAAACCAAGATGAGAGAGAGGCAGAGGAGGTCCATCACCACCAACATCTTCCACGGCCTCCGTAAGCATGGCGGCTACCCTCTCTCCCCTCGCGCTGACATTAATGAAGTCCTCCGCCACCTCGCCAGCGAGGCCGGCTGGATCGTCGACCCCGACGGCACCACCTACCGCCACTCCCCCACTCCCTCTTCTGGTTTCGCTTCTTGCCCCGTCTGCGGCGCCGGCAAGAGAAGTACCGCCTCCACGCCCACCAGCAGCGTCGTCCTCGGCGGCGAGTGCTCCACCACGACATCCCCTCGCCGCTTCCAAGTCGGAGACTCAGTGCTTTCCCCGTACTTGGCTGGCTGTGGTGGGTCCGGCGTTGGTGATGTTGTGACGTCTGAGCGTGACATTCCTCTGGCACTCTACATGTACGGTGGACTTCAGCATTCCGGAACGACAGGAGAACCGTCGACGGCAGCGGTTACATATCAGCAGCAGCGGCAACTGTACCTGCAAGAGGCGAGAGCACCGATGACCTCTCCTCCCCGTCCGGCTTGA 648 0.6034 MKDATAAAAMTSSGRGGGGGSGSGSGEKVRSVSDKEKTKMRERQRRSITTNIFHGLRKHGGYPLSPRADINEVLRHLASEAGWIVDPDGTTYRHSPTPSSGFASCPVCGAGKRSTASTPTSSVVLGGECSTTTSPRRFQVGDSVLSPYLAGCGGSGVGDVVTSERDIPLALYMYGGLQHSGTTGEPSTAAVTYQQQRQLYLQEARAPMTSPPRPA* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0611 215 MobiDBLite consensus disorder prediction 1 45 - -
Vvi10g0611 215 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 25 152 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vvi10g0611 215 MobiDBLite consensus disorder prediction 29 45 - -
Vvi10g0611 215 Pfam BES1/BZR1 plant transcription factor, N-terminal 26 137 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0611 Vvi-Chr10 8385360 8386100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0611 14 101 Glycoside Hydrolase AT2G45880 53.409 1.03e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vvi10g0611 BES1_N 3.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0611 - K20818 vvi:100854662 411.379