Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0598 ATGGACAACGGAGACATTGAAAACGCGGAAGACGAGTTCGGCGGGCAAAGCGGACGCAAATACAGACCAGTCGTCTCGCATGACCGCGCTGTTCTCCAAATGTCCTCTTTGGATTCCGGATCTTCCTCTTCTCTCCCCGTCCCTCAATCACCTTTCACGAACCTTAAAATAAGCATGCAGGGAAACATGAGTTCTGATGCAAGAGAAGAGTCATCTACTAATCATGAAGAACTCAATGGTTCTGAAAGAGAATCCAAATTGGAATTGTTCGGTTTTGACTCTCTTGTTAATATTCTAGGTCTTAAGAGTATGACAGGGGAGGCAATTGCAGCTCCTTCGAGTCCTAGAGATGGCGAGGATGTTTCGAATACACCTGGGCGTTCCAAGGCTAATGATCTCAAATTAGGGACATTGATGGGAGTATTTGTGCCGTGCTTGCAAAACATTTTAGGAATTATCTACTATATACGATTTTCTTGGATTGTTGGTATGGCAGGCATTGGTCAGTCGCTTTTGCTGGTGTCCTTTTGTGGTTTGTGTACTTTCCTGACTTCGATATCATTGAGTGCTATCGCAACTAATGGTGCAATGAAGGGTGGGGGGCCATATTATCTCATTGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGACTATGTTTCTTCCTTGGGAATGCAGTAGCTGGATCTCTTTATGTGCTGGGAGCTGTAGAAACCTTCTTAGATGCCTTGCCAGGTGCTGGGATTTTTGGAGAGGTTGTCACAAAAGTTAATGGCACAGAAGCTGCAGTGGCCGTACCAAGTCCAAATTTGCATGACCTGCAAGTCTATGGGATAGTTGTGACGATAATCCTATGCTTTATTGTGTTTGGTGGTGTTAAGATGATCAATCGGGTTGCACCTGCTTTCCTTATACCTGTTTTATTCTCCTTGTTCTGCATATTTGTTGGGGCTGTTTTGGCAAGAAAGGATCACCCTGCTGTTGGAGTCACTGGCTTGAGTTTGAAATCCTTAAAAGATAATTGGAGCTCGAGTTATCAAAATACTAATAATGCTGGAATACCTGATCCTGATGGAGCTGTAAGCTGGAATTTCAATGCACTGGTCGGTCTATTTTTCCCTGCTGTAACGGGAATTATGGCAGGTTCAAATCGCTCTGCTTCATTGAGAGACACTCAACGTTCAATTCCTGTTGGAACATTGGCTGCGACTCTTTCTACTTCTGCAATGTACCTATTTTCTGTGCTTTTATTTGGATCTCTAGCAACAAGGGAGAAACTTTTGACAGACAGGCTACTAACTGCTACAATTGCTTGGCCTTTACCGGCAATTATTTACATTGGAATTATCCTTTCAACCTTAGGGGCGGCTCTTCAAAGCCTTACAGGTGCTCCACGGCTGCTTGCAGCAATAGCCAATGATGATATCCTTCCTGTTCTTCATTACTTCAGAGTTGCTGAAGGGAGTGAACCTCATATTGCAACCCTCTTTACTGCATTAATTTGTATTGGGTGTGTCATAATCGGGAATCTGGATCTTATCACACCAACAATTACCATGTTTTTCCTTTTGTGTTATGCTGGTGTGAACTTGTCTTGCTTCCTTCTGGATCTTCTAGATGCTCCCAGTTGGCGTCCACGATGGAAATTTCACCACTGGAGCCTCTCTCTTCTTGGAGCAGTTCTTTGTATAGTGATCATGTTCTTGATATCTTGGTCATTTACTGTGGTGTCCCTAGCCCTTGCAAGTCTCATATATTATTATGTATGCATCAAAGGGAAGGCTGGGGACTGGGGTGATGGCTTCAAGAGTGCATATTTCCAACTAGCCCTTCGTAGTCTTCGATCACTGGGGGCAAGCCAAGTGCACCCAAAGAACTGGTATCCTATTCCCCTCATATTCTGCCGGCCATGGGGGAAGCTGCCAGAGAATGTGCCCTGCCACCCTAAATTAGCTGACTTTGCTAACTGCATGAAGAAAAAGGGTCGTGGAATGTCCATTTTTGTCTCTATTTTAGATGGAGATTACCATGAGTGTGCAGAAGATGCCAAGACAGCCTGCAGGCAGCTGAGTACCTACATTGACTATAAGCGCTGTGAAGGTGTTGCAGAGATAGTTGTGGCCCCCAGTATGTCAGATGGTTTCCGTGGCATTGTCCAAACTATGGGCCTAGGCAATCTTAAGCCGAACATTGTGGTCATGCGATACCCTGAAATATGGCGTCGGGAAAACCTAATTGAAATCCCAGCTACCTTTGTTGGCATAATTAATGACTGCATTGTTGCAAACAAGGCAGTTGTGATTGTCAAGGGCCTTGATGAATGGCCCAATGAGTATCAAAGGCAGTATGGTACTATTGATCTGTATTGGATCGTGAGAGATGGGGGCCTTATGCTTCTCCTCTCCCAGCTCCTCCTTACCAAGGAGAGCTTTGAGAGTTGTAAGATTCAGGTCTTCTGCATTGCGGAGGAGGATTCTGATGCAGAGGAGCTCAAGGCTGATGTCAAGAAGTTTTTGTATGATCTTCGCATGCATGCTGAAGTGATTGTTATATCGATGAAATCATGGGATGCCCAAGGAGAAGGAGTGTCCCAGCAAGATGAATCAATAGAGGCATTCACGGGTGCTCAGCGGCGGATTGCTGGTTACTTGAGTGAGATGAAGGAGGCAGCTAAGAGGGAAGGAACTCCACTGATGGCTGATGGGAAATCTGTGGTTGTGAATGAGCAACAGGTGGAGAAATTTCTTTACACAACACTGAAGCTTAATTCGACAATACTTAGATACTCAAGAATGGCTGCAGTCGTGCTTGTGAGCTTACCACCACCACCTCTCAACCACCCAGCGTATTTCTACATGGAGTACATGGATCTTTTGGTAGAGAATGTACCTAGGCTTTTGATGGTAAGGGGATACCGTAGAGATGTTGTCACCCTTTTCACATAG 2949 0.45 MDNGDIENAEDEFGGQSGRKYRPVVSHDRAVLQMSSLDSGSSSSLPVPQSPFTNLKISMQGNMSSDAREESSTNHEELNGSERESKLELFGFDSLVNILGLKSMTGEAIAAPSSPRDGEDVSNTPGRSKANDLKLGTLMGVFVPCLQNILGIIYYIRFSWIVGMAGIGQSLLLVSFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGSLYVLGAVETFLDALPGAGIFGEVVTKVNGTEAAVAVPSPNLHDLQVYGIVVTIILCFIVFGGVKMINRVAPAFLIPVLFSLFCIFVGAVLARKDHPAVGVTGLSLKSLKDNWSSSYQNTNNAGIPDPDGAVSWNFNALVGLFFPAVTGIMAGSNRSASLRDTQRSIPVGTLAATLSTSAMYLFSVLLFGSLATREKLLTDRLLTATIAWPLPAIIYIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLHYFRVAEGSEPHIATLFTALICIGCVIIGNLDLITPTITMFFLLCYAGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGAVLCIVIMFLISWSFTVVSLALASLIYYYVCIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKTACRQLSTYIDYKRCEGVAEIVVAPSMSDGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLIEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDSDAEELKADVKKFLYDLRMHAEVIVISMKSWDAQGEGVSQQDESIEAFTGAQRRIAGYLSEMKEAAKREGTPLMADGKSVVVNEQQVEKFLYTTLKLNSTILRYSRMAAVVLVSLPPPPLNHPAYFYMEYMDLLVENVPRLLMVRGYRRDVVTLFT* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0598 982 Gene3D Amino acid/polyamine transporter I 134 598 - -
Vvi10g0598 982 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 71 979 IPR004842 GO:0006811|GO:0015377|GO:0016020
Vvi10g0598 982 NCBIfam K-Cl cotransporter 61 982 IPR004842 GO:0006811|GO:0015377|GO:0016020
Vvi10g0598 982 FunFam Cation-chloride cotransporter 1 134 598 - -
Vvi10g0598 982 MobiDBLite consensus disorder prediction 1 82 - -
Vvi10g0598 982 MobiDBLite consensus disorder prediction 12 26 - -
Vvi10g0598 982 Pfam Amino acid permease 140 616 IPR004841 GO:0016020|GO:0055085
Vvi10g0598 982 Pfam Solute carrier family 12 782 981 IPR018491 GO:0006811|GO:0016020|GO:0022857
Vvi10g0598 982 Pfam Solute carrier family 12 650 771 IPR018491 GO:0006811|GO:0016020|GO:0022857
Vvi10g0598 982 MobiDBLite consensus disorder prediction 32 68 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0598 135 982 Inorganic Solute Cotransporters AT1G30450 84.335 0.0 1471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0598 K14427 - vvi:100251415 1908.65