Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0591 ATGGCTTTTGAGCCTTTGGTTTGGTATTGTCAACCGGTGGCAAATGGGGTTTGGGCAAAAGCAGCAGAAAGTGCTTTTGGCCCTTACACACCCTGTGCAGTTGACTCCATTGTGGTTTGCATATCTCATTTGGTTCTTTTGGGTCTGTGCTGTTACCGAATATGGCTGATTAAGATGGATTTCAAAGTCCAGAGGTTCTGCTTGCAGTCGAATTACTACAATTATATGTTGGGACTGTTGGCATGTTATTGTACTGCAGAACCTTTATTCAGGTTGGTGATGGGTGTTTCGATTTTTGATTTGGATGAACAGACTGGGCTCGCTCCGTATGAGATAGTTTCTTTGATCATTGAAGCTGCTACTTGGTGCTCCATGCTGGTTATGATTGGTGTTGAGACTAAAATTTACATTCGGCAGTTTCGATGGTATGTCCGATTTGGAGTCATTTATCTCTTGGTAGGGGATGCTGTGATGCTCAATCTCATTCTTTCTCTGAAGGATTCCTACAGTAGATCTGTACTCTATCCGCCAATCAGCTCAGTCCTCTGCCAGGTTCTGTTTGGAATTTGCCTTCTCGTGCATGTTCCTAATTTAAATCCTTATGTGGGTTACACCCCGATGCAAAGTGATTCTCTGGAAAACACCAAATATGAAGTGCTTCCTGGAGGAGACCAAATTTGTCCTGAGAAGCACGCAAACATGTTTTCTAGGATATATTTTGGGTGGATGACTCCGCTCATGCAGCAAGGCTATAAAAAACCCATCACTGAAAAGGATATTTGGAAGCTAGATACATGGGATCAGACTGAAACACTTAGCAGAAGGTTCCAGAAATGTTGGATTGAAGAATCTCAAAGGTCCAAGCCAAGACTTCTAAGAGCATTAAATTGTAGTCTTGGAGGAAGGTTCTGGCGGGGAGGCTTCTTCAAGATTGGCAATGATCTTTCTCAGTTTGTGGGGCCAGTCTTACTGAACCATCTCTTACAGTCGATGCAACGAGGTGATCCAGCTTGGATTGGTTATATCTATGCATTCTCAATTTTTATTGGGGTGTCATTGGGGGTGCTTTGTGAAGCTCAGTACTTTCAGAATGTTATGCGCGTCGGTTTTCGGCTAAGATCAACTCTGGTGGCTGCTATATTCCGCAAATCTTTAAGACTAACCCATGAGGGTCGTAAGAACTTCCCGTCTGGAAAGATAACAAATATGATGACAACAGATGCTAATGCACTTCAGCAAATATGTCAACAACTACATGCTTTATGGTCTGCTCCATTTCGTATCATCATCGCTATGGTTCTTCTTTATCAGCAATTAGGGGTTGCTTCCCTCCTTGGTTCATTGATGCTACTTCTCATGCTCCCGATACAGACATTTATCATTAGCAAAATGCGAAAATTGTCCAAGGAAGGATTGCAACGAACTGACAAGAGAGTCAGCCTCATGAATGAAATTTTGGCTGCCATGGACACTGTGAAATGTTATGCATGGGAAAAGAGTTTCCAGTCTAAAGTTCAAAGCATGCGGAATGATGAATTGTCTTGGTTTCGTAAAGCACAACTGCTATCAGCTTGCAACAGTTTCATCCTAAATAGCATCCCAGTTATTGTGACGGTAACCTCATTTGGGGCATTCACTTTGCTCGGTGGTGACTTAACACCTGCAAGAGCATTTACGTCACTTTCTCTGTTTGCGGTGCTGCGGTTCCCTTTAAACATGCTCCCCAATTTAATTACTCAGGTTGTAACTGCACATGTATCAATACAACGTCTAGAGCAACTGTTCTTAACTGAAGAGAGAGTTCTTGCACCAAATCCAACTCTTGAACCAGGACTTCCAGCCATCTCAATCAAGGATGGATACTTTTCTTGGGATTCAAAGGTAGAGAAGCCCACTTTATCAAATATCAATTTGGATATACCAGTTGGTAGCTTAGTTGCAGTTGTTGGTGGCACTGGAGAAGGAAAGACATCTCTCATATCAGCAATGCTTGGGGAGCTGCCTCCTTTGTCAGATGCAAGTGTTGTTATCAGAGGGACTGTTGCATATGTTCCTCAAATTTCATGGATTTTCAATGCCACTGTACGGGGAAACATATTGTTTGGTTCTGATTTTGAGCCTGCACGATATTGGAAGGCTATAGATGTAACTGAGCTGCAGCATGACCTTGACTTACTTCCTGGTCATGATCTTACAGAGATCGGTGAAAGGGGGGTGAATATCAGCGGTGGGCAAAAGCAAAGAGTTTCAATGGCTAGGGCTGTATATTCTAATTCAGATGTATACATATTCGATGACCCTTTAAGTGCTCTAGATGCTCATGTCGCTCAACAGGTTTTCAGCAACTGTATCAAAGAAGAGTTGAAAGGGAAGACTAGAGTGCTTGTTACAAACCAGCTACATTTTCTTCCTCATGTAGATAGAATTATACTAGTCTCTGATGGTACAGTGAAAGAAGACGGAACCTTTGATGATCTCTCTAAAAACAGCAAGTTATTCCAAAAACTAATGGAAAATGCTGGGAAAATGGAAGAGCAAGTGGAAGAAAATGAGTGCAGAGAAAATCTAAGTAACAATAAATCAAAGCCCACTACTAATGGTGAAGTGAATGAGCTGCCAAAAAATGCAATCCATTCAAATAAAGGGAAAGAAGGCAAATCTGTCCTTATCAAGCAGGAAGAACGAGAAACAGGCATTGTTAGTTGGAAGGTTTTGATGAGGTATAAAGATGCATTAGGGGGCCTATGGGTAGTTACACTACTTTTTGCATGCTATGTGTTGACTGAAGTTCTTCGAGTTTTAAGTAGCACCTGGTTAAGCGTCTGGACGGATCAAAGCATGTCAAAGGATTATAGACCTGGTTACTACAATTTGATTTACGCACTTCTATCATTTGGTCAGGTAATGGTGACATTGGGAAACTCATTTTGGTTGATCACTTCAAGTCTTCATGCAGCCAAAATATTGCACAATGTCATGTTAAACTCTATTTTAAGAGCTCCAATGGTATTCTTCCACACCAACCCTATTGGACGGATAATCAATAGGTTTGCAAAGGATCTTGGCGATATAGATCGCAATGTTGCCCCGTCTGCTAATATGTTTCTGGGTCAAGTGTGGCAGCTCCTTTCCACTTTTGTACTGATTGCCATTGTCAGCACCATATCCCTGTGGGCCATAATGCCACTTCTGATATTGTTTTATGCAGCCTATCTATATTACCAGAGCACATCCCGTGAAGTCAAACGTTTGGATTCCATCACCAGATCTCCTGTATATGCCCAATTTGGAGAAGCATTAAATGGTTTATCAACCATTCGAGCATATAAAGCATACGATCGGATGGCAAGTATAAATGGGAAATCCATGGATAATAATATCAGATTCACCCTTGCTAACATTAGCTCAAATCGATGGCTCACCATAAGGCTGGAAACATTAGGAGGCCTCATGATTTGTTTGACAGCAACCTTTGCTGTCATGGAGAACAGCAGAGAAGAAAACCCGGCAGCATTTGCATCTACAATGGGTCTACTCCTTAGTTATACTTTAAATATCACGAGCCTGTTAAGTGGTGTTCTTAGACAAGCCAGCAGGGCTGAAAATAGTTTTAATGCTGTTGAGCGTGTTGGCACCTATGTTGATTTGCCTTCTGAGGCTCCAACTATTATAGAGAGCAACCGTCCCCCACCTGGTTGGCCTTCATCAGGATCTATCAGGTTTGAGGATGTTGTTCTGCGTTACAGGCCTGAACTTCCTCCAGTTTTGCATGGAATATCATTTAAAATTTCTCCAAGTGAGAAGCTAGGCATAGTTGGAAGAACTGGTGCAGGGAAATCTAGCATGATCAATGCTCTATTTCGGATTGTAGAACTAGAAAGAGGAAGAATATGGATAGATGAGTATGACATTGCAAAATTTGGACTCACAGATCTGCGTAAAGTTTTAAGCATTATACCACAATCTCCAGTTCTTTTCTCTGGAACTGTAAGATTTAATCTTGATCCTTTCAATGAACACAATGACGCTGACCTTTGGGAGGCTTTAGAGAGGGCACATCTCAAGGATGTCATCAGGAGAAATTCTTTTGGTCTGGATGCTGAGGTTGCGGAGGGAGGGGAGAATTTCAGTGTTGGGCAGAGACAATTATTAAGTCTTGCTCGAGCATTGCTGCGAAGATCAAAGATTCTTGTTCTTGATGAAGCAACTGCAGCAGTTGATGTTAGAACTGATGCTCTTATTCAAAAGACTATCCGAGAAGAATTCAAAACATGCACCATGCTTGTTATTGCTCACAGACTAAATACCATCATTGATTGTGATCGGATTCTTGTCCTTGATGCTGGTCAGGTGGTAGAGTATGATACTCCAGAAGAACTGCTTCAAGACGAAGGAAGCTCTTTCTCTAGAATGGTCCGAAGTACAGGGGCTGCAAATGCCCAGTACTTACGCAGCTTAGTATTTGGAGAGGATGGACAGAAAAAATCAGGCAGAGAAGAGGCCAAGCAATTGGATAGGCAGAAAAGATGGCTTGCTTCTTCCCGCTGGGCTGCTGCTACGCAGTTTGCACTTTCTATTAGCCTGACATCTTCACAGAATGGCCTTCAATTTTTGGACGTTGAAGACGAGATGAATATCCTCAAGAAAACAAATGATGCAGTACTTACTCTGCGGGGAGTTCTGGAGGGAACACATGATGAAGTCATTGAAGAGATGCTAAAGGAATACCAGGTTCCTAGAGATAGGTGGTGGTCAGCTCTCTACAAAATGGTTGAAGGTCTTGCAGTGATGAATCGGTTGGCTCGCCACAGGTTTCAACAGTCAGAACATGATTTTGAAGACACAACACTTGATTGGGACCTTACTGAAATGTAA 4875 0.4215 MAFEPLVWYCQPVANGVWAKAAESAFGPYTPCAVDSIVVCISHLVLLGLCCYRIWLIKMDFKVQRFCLQSNYYNYMLGLLACYCTAEPLFRLVMGVSIFDLDEQTGLAPYEIVSLIIEAATWCSMLVMIGVETKIYIRQFRWYVRFGVIYLLVGDAVMLNLILSLKDSYSRSVLYPPISSVLCQVLFGICLLVHVPNLNPYVGYTPMQSDSLENTKYEVLPGGDQICPEKHANMFSRIYFGWMTPLMQQGYKKPITEKDIWKLDTWDQTETLSRRFQKCWIEESQRSKPRLLRALNCSLGGRFWRGGFFKIGNDLSQFVGPVLLNHLLQSMQRGDPAWIGYIYAFSIFIGVSLGVLCEAQYFQNVMRVGFRLRSTLVAAIFRKSLRLTHEGRKNFPSGKITNMMTTDANALQQICQQLHALWSAPFRIIIAMVLLYQQLGVASLLGSLMLLLMLPIQTFIISKMRKLSKEGLQRTDKRVSLMNEILAAMDTVKCYAWEKSFQSKVQSMRNDELSWFRKAQLLSACNSFILNSIPVIVTVTSFGAFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNLITQVVTAHVSIQRLEQLFLTEERVLAPNPTLEPGLPAISIKDGYFSWDSKVEKPTLSNINLDIPVGSLVAVVGGTGEGKTSLISAMLGELPPLSDASVVIRGTVAYVPQISWIFNATVRGNILFGSDFEPARYWKAIDVTELQHDLDLLPGHDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVAQQVFSNCIKEELKGKTRVLVTNQLHFLPHVDRIILVSDGTVKEDGTFDDLSKNSKLFQKLMENAGKMEEQVEENECRENLSNNKSKPTTNGEVNELPKNAIHSNKGKEGKSVLIKQEERETGIVSWKVLMRYKDALGGLWVVTLLFACYVLTEVLRVLSSTWLSVWTDQSMSKDYRPGYYNLIYALLSFGQVMVTLGNSFWLITSSLHAAKILHNVMLNSILRAPMVFFHTNPIGRIINRFAKDLGDIDRNVAPSANMFLGQVWQLLSTFVLIAIVSTISLWAIMPLLILFYAAYLYYQSTSREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMASINGKSMDNNIRFTLANISSNRWLTIRLETLGGLMICLTATFAVMENSREENPAAFASTMGLLLSYTLNITSLLSGVLRQASRAENSFNAVERVGTYVDLPSEAPTIIESNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGISFKISPSEKLGIVGRTGAGKSSMINALFRIVELERGRIWIDEYDIAKFGLTDLRKVLSIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSFGLDAEVAEGGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKTCTMLVIAHRLNTIIDCDRILVLDAGQVVEYDTPEELLQDEGSSFSRMVRSTGAANAQYLRSLVFGEDGQKKSGREEAKQLDRQKRWLASSRWAAATQFALSISLTSSQNGLQFLDVEDEMNILKKTNDAVLTLRGVLEGTHDEVIEEMLKEYQVPRDRWWSALYKMVEGLAVMNRLARHRFQQSEHDFEDTTLDWDLTEM* 1625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0591 1624 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Vvi10g0591 1624 Coils Coil 833 853 - -
Vvi10g0591 1624 CDD ABC_6TM_ABCC_D1 306 591 IPR044746 GO:0140359
Vvi10g0591 1624 MobiDBLite consensus disorder prediction 848 880 - -
Vvi10g0591 1624 Gene3D - 1222 1475 IPR027417 -
Vvi10g0591 1624 ProSitePatterns ABC transporters family signature. 1376 1390 IPR017871 GO:0005524|GO:0016887
Vvi10g0591 1624 FunFam Multidrug resistance-associated protein member 4 1223 1475 - -
Vvi10g0591 1624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 838 IPR027417 -
Vvi10g0591 1624 MobiDBLite consensus disorder prediction 857 873 - -
Vvi10g0591 1624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Vvi10g0591 1624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1465 IPR027417 -
Vvi10g0591 1624 CDD ABCC_MRP_domain1 615 816 - -
Vvi10g0591 1624 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1479 - -
Vvi10g0591 1624 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 306 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi10g0591 1624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1473 IPR003439 GO:0005524
Vvi10g0591 1624 FunFam ABC transporter C family member 2 882 1220 - -
Vvi10g0591 1624 Pfam ABC transporter transmembrane region 919 1160 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi10g0591 1624 Pfam ABC transporter transmembrane region 306 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi10g0591 1624 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 920 1202 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vvi10g0591 1624 CDD ABCC_MRP_domain2 1237 1457 - -
Vvi10g0591 1624 FunFam ABC transporter C family member 2 609 855 - -
Vvi10g0591 1624 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Vvi10g0591 1624 Pfam ABC transporter 1256 1404 IPR003439 GO:0005524
Vvi10g0591 1624 SUPERFAMILY ABC transporter transmembrane region 915 1219 IPR036640 GO:0005524|GO:0016020
Vvi10g0591 1624 CDD ABC_6TM_ABCC_D2 918 1214 IPR044726 GO:0140359
Vvi10g0591 1624 FunFam ABC transporter C family member 2 279 600 - -
Vvi10g0591 1624 SMART AAA_5 1265 1458 IPR003593 GO:0016887
Vvi10g0591 1624 SMART AAA_5 642 816 IPR003593 GO:0016887
Vvi10g0591 1624 Gene3D - 607 865 IPR027417 -
Vvi10g0591 1624 SUPERFAMILY ABC transporter transmembrane region 289 591 IPR036640 GO:0005524|GO:0016020
Vvi10g0591 1624 Gene3D ABC transporter type 1, transmembrane domain 281 600 IPR036640 GO:0005524|GO:0016020
Vvi10g0591 1624 Gene3D ABC transporter type 1, transmembrane domain 881 1220 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0591 Vvi-Chr10 7766126 7821629 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0591 615 829 Calmodulin-binding Proteins AT2G36910 29.825 2.89e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0591 - K05665 vvi:100246392 3188.28