Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0567 ATGGCAAGCAGTGACCACATAGTTCTTTTAGATTTCTTGGGAAGCCCTTTTGGGATGAGGGTACGACTGGCCTTGGCAGCCAAAGGGATCGAGTATCAGATTGAGGAAGAAGACTCGACCCAAAGTAAAAGCTCTCTACTCTTGAAATTGGATACAGTTCATAAGAAAATTCCAGTTCTAATTCACAATGGGAAGCCCATATGCGAGTCCTTGATAATAGTGGCATACATTGATGAGGTTTGGAAGGATAGATGTCCGCTTCTGCCGGCTGACCCTTACCTGCATTGA 288 0.4479 MASSDHIVLLDFLGSPFGMRVRLALAAKGIEYQIEEEDSTQSKSSLLLKLDTVHKKIPVLIHNGKPICESLIIVAYIDEVWKDRCPLLPADPYLH* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0567 95 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 85 IPR004045 -
Vvi10g0567 95 Pfam Glutathione S-transferase, N-terminal domain 9 79 IPR004045 -
Vvi10g0567 95 Gene3D Glutaredoxin 3 90 - -
Vvi10g0567 95 PANTHER GST N-TERMINAL DOMAIN-CONTAINING PROTEIN 4 93 - -
Vvi10g0567 95 CDD GST_N_Tau 7 81 - -
Vvi10g0567 95 FunFam Tau class glutathione S-transferase 1 90 - -
Vvi10g0567 95 SUPERFAMILY Thioredoxin-like 6 83 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0567 Vvi-Chr10 7197211 7197498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0567 4 93 Glutathione S-transferase Gene Family AT1G78340 60.000 3.37e-37 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0567 K00799 - vvi:100232915 154.836