Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0523 ATGACGGGAGGGTTTGCGTATGTGAAGTTACAGAGCTTCAGTATATTGCAGGCTAGAGCCATAATACTTACTGCAAGTAGAGAAGTGGAGACGAAAACCCCAACTGCCTCAGACGTGACCATGGTCTCGCCATCTCTGCAATCCCAGCTGTACAGCCCTACTGGCCTTTCAATGAAGAGATCGCTGCGAAGCTTCCTCCAGAAGCGAAAAAATAGGATTGAAGCCACCTCCCCATACGGTCATTAG 246 0.4919 MTGGFAYVKLQSFSILQARAIILTASREVETKTPTASDVTMVSPSLQSQLYSPTGLSMKRSLRSFLQKRKNRIEATSPYGH* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0523 81 Pfam Jas motif 59 79 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0523 Vvi-Chr10 6521532 6522040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0523 16 79 Tify Gene Family AT1G30135 57.576 5.45e-13 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vvi10g0523 Jas_motif 3.7e-06 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0523 - - vvi:100246382 128.642