Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi10g0505 | ATGGAAAGCAAAAGAGAGAGGGCCCTTGCTTGTGTGCTCTTACTTGGAGCCACTTACTATGGGACTGCTGTGGATTTATGGAGCACTGGTTGTATACTGGCTGAACTATATGCTGGCAAGCCTATAATGCCAGGAAGAACAGAGGTGGAACAGTTGCATAAAATTTTCAAGCTTTGTGGCTCTCCATCTGAGGATTATTGGAGAAAATCAAAGTTGCCACATGCAACCATATTTAAGCCCCAACAGCCTTATAGGCGTTGTGTTGCAGAAACATTTAAAGACTTTCCTACACCTGCATTAGGGCCTATGGAAACACTTCTTTCCATAGATCCTGCTGATCGTGGATCTCCAGCCTCTGCTCTTAAAAGTGAGTTCTTTACAGTAAAGCCACTTCCTTGTGATCCTTCAAGCTTGCCTAAGTATCCTCACAGCAAAGAGTTTGATGCAAAAGTACGAGATGAAGAAGCTAGAAGTTCAGGGGATATAGATCTTTGCTTTGCCAATGAGGATGAAACAAGAGAGCTGTTAAGAGATGACGAAAATGCTAGTCCTGAGGTTGCTCTTGAATTTCTTGCTAAGCACTGCCAATGGGCAGTGGTGACACTAGGTTCTAATAGATGCCTTGGAAAATGCGGAAGAGAGATGTGCCCTGTGGAGAATTAG | 663 | 0.4374 | MESKRERALACVLLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVAETFKDFPTPALGPMETLLSIDPADRGSPASALKSEFFTVKPLPCDPSSLPKYPHSKEFDAKVRDEEARSSGDIDLCFANEDETRELLRDDENASPEVALEFLAKHCQWAVVTLGSNRCLGKCGREMCPVEN* | 221 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi10g0505 | 220 | FunFam | - | 15 | 163 | - | - | |
Vvi10g0505 | 220 | SUPERFAMILY | Ribokinase-like | 127 | 212 | IPR029056 | - | |
Vvi10g0505 | 220 | ProSiteProfiles | Protein kinase domain profile. | 1 | 126 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g0505 | 220 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 133 | IPR011009 | - | |
Vvi10g0505 | 220 | Pfam | Protein kinase domain | 15 | 126 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g0505 | 220 | Gene3D | Transferase(Phosphotransferase) domain 1 | 13 | 126 | - | - | |
Vvi10g0505 | 220 | Gene3D | - | 127 | 220 | IPR029056 | - | |
Vvi10g0505 | 220 | PANTHER | CELL DIVISION PROTEIN KINASE | 13 | 132 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi10g0505 | Vvi-Chr10 | 6096911 | 6105259 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi10g0505 | 13 | 159 | Core Cell Cycle Gene Families | AT5G10270 | 52.027 | 1.28e-43 | 151 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Vvi10g0505 | Pkinase | 1.5e-10 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi10g0505 | - | - | vvi:104879163 | 299.671 |