Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0443 ATGGGGGATAAGACGGGAGATATTGCAAGTCAAACTGATGCAACTATATGTCTTGTTCTAGATATTGCAAATGGTGATAGCCTATGGAAAGCGGAGAATCCCTTGGTTAAGTCTGTCCCTGTTTTCGTTCGGCAGATGGCCCTCACCCTCCTCGTCACTCGCCTTCTCGTCTTCATCCTCAAACCACTCAAACAGCCTCGCATCATGGCCGAAATTCTCGCTGGTATGTTCTTCAATCCAGGTATTTTGGGTAGGATCTACAACAACATGGCCTTGAAATTATTTCCATATGACAGTTGGGCGGTGCTGGAGACATTGGCGAACGTGGGACTGGTTTTCCACGTCTTCCTGGTGGGACTAGAGATAGACCTAACCTCGGTGATGACGACTGGACAAAGGGCCTTCTCCATTGCCATATCTGGGATTGTAGTTCCACTGGCCGTAGGTTCAGGCTCCTTTCTTATGTTGAAGGATTATCAGGAAGGAAACTTTACTTTTGCTGGTTCTGTCTTGTGGGGGCTTTCTGTCACCGTAACAGGCGTCCACATGCTGACCCGAGTCCTGGCAAACCTCAAGCTCCTCAACACCGACCTCGGAAAATTGGCCATGTCTTCCGCCGTCATCAATGAACTATTCTTGTGGGTGATTCTTGCAGTGGCAATACCAATAGTAAACGACGTCGGGACTTCCTGCTGGGCAATCCTGGCCACCGCTGCCTTTGTATTGTTTTTCATTTTTTTGGTTCGCCCAGCCATAGTATGGATGCTTAGCAGATATCCTGAGGGGGACAGCTTGAGCGAATGCCAAGTCGGCCTCATCCTCTTCGGGGTTGTGCTGTCGGCGGTTGCCACAGACGCCTGCGGCAGCTACTCCATCATCGGTGCTTTCGTGTTCGGACTGGTGTTCCCCACTGGGGTTCAAGCAACTGAGATTATGGAGAAGCTGGAGGATCTTGTGTCGGGGATTCTTGTGCCTCTCTACTTCGTGACTTGCGGGATACGAATCAATCTGGAGTCTCTTTGGGACAGTGATGCCATGGCTAAGGTGATGCTGGTTGTAGCCTTACTTTGTTCAGCCAAGGTCATAAGCACTCTCCTGGTTTATATCTTGTATAAAATGCCTATCCAGGAGGGGATAGGTCTTGGGTTGGTTTTGAATACCAAAGATATCTTGGCCTTTATCATCCTTCATATTGGCAGAGATAGACAAGCATTCGACAATAAGATGTTCACAGTCATGGTGGTGGCCATGCTGGTGATGACGGGGATGGTGACCCCGCTTATCAACTTCGTATACCAGCCAAGAACACGTTTCATGCGGTACAAGAACAGGAGTATTGAAAAATCCCAAGCAGATGGAGAGCTCAGAATCCTTACATGCTTGCATCAAACCCGCAATGTTCCCGGCATCATCAGCCTTCTCGAAGCTTCCAACCCCATTCCACGCTCACCACTCCGCGTCTTCGCCCTCCACCTCGTCGAACTCACCGACCGCGCCTCAGCTATGCTCATTATCCACAACACCCAGAATTCTGGGCCTTCCACCACCCTCGCCAACCACAGAAGCACCCAAGCCCAATCGGAGCAGATCATCAGCGCTTTTGAGGACCTCGAGCAGCGCAACCTCGCCGTCTCCGTCCAGTCTCTCACCGTCATGTCCCCTTACGCCACCATGGACGAGGACATCTGCAGCATCGCCGAGGACAAGCGTGTCGCCCTCACTATAATCCCTTTCCACAAACAGCAGACCGCTGACGGCCAGATGGAAGAGGGGGATGCCGCAGTGAGGCGCGTCAACCAGAACGTCTTGGCGAACACGTCGTGCTCTGTAGCCATCTTCGTGGACCGTGGGTTCGGGGCATTGGATTACCAAGACCGCCGCATTTGCATGCTGTTCTTCTGCGGCCCTGACGACCGTGAGGCCCTGTCTTATTCCTGGAGAATGGTCGGCCACCCAACTGCGATGCTCGCTGTAATTCGCTTCATTCCCAGCGAAAATGCAGCTGACCTCGAGACCTTAGAGGAGTACGTCCCAGGTGATAGCAACGGTATTCTAAGTGCAATATCCGAGTACGAGAAGCAGAAATCACTGGATGATGAATTCGTGGAGAATTTCAGGATAAGAACTTCTGGGGATGAAAACATCTTATACAGAGAAGTAGTACTGAATAATGGGGAAGAGGCGGTGACAGCCATAAGAGAAATGGACCACAATTATGATCTGTACGTAGTAGGAAGAGGACAGAAGGTGCTATCGCCGTTGACCGCAGGCCTAAACGAATGGAGCGACTGTCCGGAGCTGGGTGCAATAGGGGATATACTAGTGACATCCGAATTCGCGTCCTCGGCGTCGGTGCTGGTGATTCAGCAGTTTGAAGGGGCGGCAGGGTTGACAGTGTCTGAATCTGGATCGTCGGATGGGTCGCTGAATGGTGGGGATACGAAGGGTTTTGAGCATTCGAATTGGCGGCAGGCGGGGGAAGATGGTGGGTTTGATCCCTTTGTGAGAAGTAGAGGTTTGGTTGTGCAGAGGCGGCGATGGTGTAGAAGCAGTTTTATATGGAGGGAGAAAGAAACTTCGGTTGCTTCACCTTCACGATTTGAGGGTCAGATATGTCTTTTCACAAGGTTGCTTGAGGATATGTTGGTAATTCAAAATTTCATAACTGCCCCTGTTCCGCGTTTTCGTGGGTCAAAAAGCAGGGAAAAACGTGGGACGTGGTCCTCCCACCTGTATCTATAG 2742 0.5102 MGDKTGDIASQTDATICLVLDIANGDSLWKAENPLVKSVPVFVRQMALTLLVTRLLVFILKPLKQPRIMAEILAGMFFNPGILGRIYNNMALKLFPYDSWAVLETLANVGLVFHVFLVGLEIDLTSVMTTGQRAFSIAISGIVVPLAVGSGSFLMLKDYQEGNFTFAGSVLWGLSVTVTGVHMLTRVLANLKLLNTDLGKLAMSSAVINELFLWVILAVAIPIVNDVGTSCWAILATAAFVLFFIFLVRPAIVWMLSRYPEGDSLSECQVGLILFGVVLSAVATDACGSYSIIGAFVFGLVFPTGVQATEIMEKLEDLVSGILVPLYFVTCGIRINLESLWDSDAMAKVMLVVALLCSAKVISTLLVYILYKMPIQEGIGLGLVLNTKDILAFIILHIGRDRQAFDNKMFTVMVVAMLVMTGMVTPLINFVYQPRTRFMRYKNRSIEKSQADGELRILTCLHQTRNVPGIISLLEASNPIPRSPLRVFALHLVELTDRASAMLIIHNTQNSGPSTTLANHRSTQAQSEQIISAFEDLEQRNLAVSVQSLTVMSPYATMDEDICSIAEDKRVALTIIPFHKQQTADGQMEEGDAAVRRVNQNVLANTSCSVAIFVDRGFGALDYQDRRICMLFFCGPDDREALSYSWRMVGHPTAMLAVIRFIPSENAADLETLEEYVPGDSNGILSAISEYEKQKSLDDEFVENFRIRTSGDENILYREVVLNNGEEAVTAIREMDHNYDLYVVGRGQKVLSPLTAGLNEWSDCPELGAIGDILVTSEFASSASVLVIQQFEGAAGLTVSESGSSDGSLNGGDTKGFEHSNWRQAGEDGGFDPFVRSRGLVVQRRRWCRSSFIWREKETSVASPSRFEGQICLFTRLLEDMLVIQNFITAPVPRFRGSKSREKRGTWSSHLYL* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0443 913 MobiDBLite consensus disorder prediction 799 817 - -
Vvi10g0443 913 Gene3D - 41 439 IPR038770 -
Vvi10g0443 913 Pfam Sodium/hydrogen exchanger family 49 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi10g0443 913 PANTHER CATION/H + ANTIPORTER 28 791 - -
Vvi10g0443 913 MobiDBLite consensus disorder prediction 799 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0443 Vvi-Chr10 5163352 5167643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0443 12 794 Antiporter Super Family AT2G13620 47.103 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0443 - - vvi:100252207 1626.3