Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0433 ATGCAGAGGGACCAGCAGTTTTGCCCCGAAAAGGTGATGCTACCTCTTGCAAATGAAGTGGGTAACGATTACATGTATAATACCCCTGTTGAATCTGCCTTTGGTGCAGTCTTTCCGCCAGGTGCAAAGGACTTGGGACCATTCCATGGTGTTGAGTTTCAACCCTCTGATGTTTGCCCAAAGAATTTTATTATCTTTGACCAGACTGATCATAGAAGCCAGATCATGTTTCATCCAGCAATTGCTCAGAAATTCAACTGTCCCAGTTTAAATCTTTGTGCAACTTACATCCATAACAATCTGGAAAAGAGAGAAATTAACATTGACGAGGGAGAAGCATCCTCTGCCCTGAAAGAGGATTCGGAAGATATTGATGCATTGTTGAGCCTGGAGGAGGAAGACCAAGAAGAATATGATGAAGAAGAAGTAAGCACAGCTCGAACTCATGGAAACTATGGAAGCAATTGCGAAGATACTTGCTCCAGTTATGGTTCAAAACCCAGAAAGATTAAGTTATCATCTTCTATCCTGAAGTCATCTAGCAGTGGCAGCAGCTGTAACAGTGAAAGGAAACGGCAGAAAATGAAGAAGATGGTGAAGGCACTGAGAGGAATTGTACCTGGTAGCAGCCAAATGAATACAGTTGCTGTTCTAGATGAAGCTGTTAGGTACCTCAAATCTCTGAAGGTTGAAGTACAGAAGCTTGGAGTGAGTAATTCGAAGAAAATATCTTGA 735 0.4218 MQRDQQFCPEKVMLPLANEVGNDYMYNTPVESAFGAVFPPGAKDLGPFHGVEFQPSDVCPKNFIIFDQTDHRSQIMFHPAIAQKFNCPSLNLCATYIHNNLEKREINIDEGEASSALKEDSEDIDALLSLEEEDQEEYDEEEVSTARTHGNYGSNCEDTCSSYGSKPRKIKLSSSILKSSSSGSSCNSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLGVSNSKKIS* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0433 244 Gene3D - 183 240 IPR036638 GO:0046983
Vvi10g0433 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 190 238 IPR036638 GO:0046983
Vvi10g0433 244 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 228 IPR011598 GO:0046983
Vvi10g0433 244 PANTHER TRANSCRIPTION FACTOR BHLH145 15 239 IPR037546 -
Vvi10g0433 244 SMART finulus 186 234 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0433 16 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 48.739 6.51e-49 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0433 - - vvi:100264025 453.366