Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi10g0396 | ATGAAATTCATGGAGGGCTTTAGTGCTGATGCTAAGGTGATGTATGAAGAAGCAAGTCAAGTTGCAAGTGATGCAGTTGGCAGCATCAGAACTGTTGCATCATTTTGTGCAGAAAAGAAGGTGATGGATATGTACCGACAAAAATGCGAAGACACCTTGAACCATGGAGTTCGACAAGGAATTATAAGTGGTGCAGGTTTTGGCTTTTCTTTCATTGCATTTTACTGCACGAACGCCTTCTGTTTCTATATCGGAGCTGTGCTTGTGCAAAACGGGAGAGCAACTTTTGAACAAGTTTTCAAGGTGTTCTTCGCTTTGACAATTTCTGCAGTTGGGATTTCTAGTACCAGTTCCATGGGTCCAGACTCCAGACACCAACAAGGGCAGGGATGCAGCTGCTTCTATATTTGA | 411 | 0.4331 | MKFMEGFSADAKVMYEEASQVASDAVGSIRTVASFCAEKKVMDMYRQKCEDTLNHGVRQGIISGAGFGFSFIAFYCTNAFCFYIGAVLVQNGRATFEQVFKVFFALTISAVGISSTSSMGPDSRHQQGQGCSCFYI* | 137 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi10g0396 | 136 | Pfam | ABC transporter transmembrane region | 1 | 110 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vvi10g0396 | 136 | Gene3D | ABC transporter type 1, transmembrane domain | 1 | 124 | IPR036640 | GO:0005524|GO:0016020 | |
Vvi10g0396 | 136 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 1 | 125 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Vvi10g0396 | 136 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 4 | 130 | IPR039421 | - | |
Vvi10g0396 | 136 | SUPERFAMILY | ABC transporter transmembrane region | 1 | 122 | IPR036640 | GO:0005524|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi10g0396 | Vvi-Chr10 | 4504715 | 4505281 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi10g0396 | 3 | 122 | Calmodulin-binding Proteins | AT2G36910 | 32.500 | 3.14e-20 | 83.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi10g0396 | K05658 | - | vvi:100253815 | 197.978 |