Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0366 ATGGGAGATACGGTTGTAGAGGAGCTACCGAGGTCTGCCACCACGGAGGATCAGGGTTCCACCCACAACCCTAACCCTAGGCCTCATGGCGACGATGAAGAGGACCTCGAGGAGGGAGAGATCGTTGTCGATGACGCCTCGGCGTCACTGAAGCAGTCGGCGGCGATAACCCATCAACCTCACCCGCTGGAGCATTCGTGGACTTTCTGGTTTGACAACCCCAGCGCTAAATCGAAGCAAGCCGCATGGGGCAGTTCGATGCGCCCGATCTACACTTTCTCTAACGTTGAAGAGTTCTGGAGCATTTACAACAATATACATCATCCGAGCAAGTTAGCTGTCGGAGCAGACTTCCATTGTTTCAAACACAAAATTGAGCCAAAATGGGAGGACCCTGTTTGTGCTAATGGGGGGAAGTGGACTGTAACCTTTGCTAAAGGGAAATCTGATACCTGTTGGCTTTATACGTTGCTAGCCATGATCGGAGAACAGTTTGATCATGGAGATGAAATCTGTGGAGCAGTGATCAATGTCAGAGCTAGACAGGAGAAAATAGCTCTATGGACCAAGAATGCTTCAAATGAAGCTGCTCAGCTGAGCATTGGAAAACAATGGAAGGAATTTCTGGATTACAGCGAAAGCATAGGCTTCATATTTCATGAGGATGCAAAGAAGCTTGACAGAGCTGCCAAGAATCGATACACGATATGA 711 0.4866 MGDTVVEELPRSATTEDQGSTHNPNPRPHGDDEEDLEEGEIVVDDASASLKQSAAITHQPHPLEHSWTFWFDNPSAKSKQAAWGSSMRPIYTFSNVEEFWSIYNNIHHPSKLAVGADFHCFKHKIEPKWEDPVCANGGKWTVTFAKGKSDTCWLYTLLAMIGEQFDHGDEICGAVINVRARQEKIALWTKNASNEAAQLSIGKQWKEFLDYSESIGFIFHEDAKKLDRAAKNRYTI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0366 236 Pfam Eukaryotic initiation factor 4E 62 214 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vvi10g0366 236 MobiDBLite consensus disorder prediction 11 25 - -
Vvi10g0366 236 FunFam Eukaryotic translation initiation factor 4E 52 236 - -
Vvi10g0366 236 SUPERFAMILY eIF4e-like 54 232 IPR023398 -
Vvi10g0366 236 Gene3D RNA Cap, Translation Initiation Factor Eif4e 52 236 IPR023398 -
Vvi10g0366 236 ProSitePatterns Eukaryotic initiation factor 4E signature. 117 140 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vvi10g0366 236 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 33 224 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vvi10g0366 236 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0366 Vvi-Chr10 4024451 4029220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0366 6 235 Eukaryotic Initiation Factors Gene Family AT4G18040 66.379 2.65e-113 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0366 K03259 - vvi:100262414 491.886