Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0364 ATGAGGTTTTGTGATTTCTTTTTGCTTTTCCTGCTTCCTCTCCTGGCCTCATGTGCAGAAAGAAAGGTCTATATAGTATATTTTGGAGAACACAGTGGACAGAAAGCACTTCATGAGATAGAGGATTATCACCACTCGTATCTTCTCTCTGTGAAAGCATCCGAGGAAGAAGCTAGAGATTCTCTCCTCTACAGTTACAAGCACAGCATCAATGGCTTTGCAGCAGTTCTCAGCCCCCATGAAGTCACAAAGCTTTCGGAGATGGATGAAGTGGTATCAGTATTCCCCAGCCAGCGGAAAAAGCACACCCTCCACACTACAAGGTCATGGGAATTTGTAGGCTTGGAGAAGGAACTGGGAAGAGAACAGTTGAAGAAGCAAAAGAAGACGAGAAATTTATTGGAAAAAGCCAGATATGGTGATCAAATCATAGTTGGGATGGTGGATAATGGTGTATGGCCGGAGTCGAAGAGCTTTAGTGATGAAGGAATGGGACCTATCCCAAAATCATGGAAGGGAATCTGCCAAACTGGAGTTGCTTTCAACTCCTCCCATTGTAACAGGAAGCTGATTGGAGCTCGATACTATCTGAAGGGTTATGAGTCGGACAATGGCCCCCTTAACACCACAACAGATTATAGATCACCACGTGACAAGGATGGCCATGGAACCCACACAGCATCAACAGTTGCAGGGCGAAGGGTTCACAATGTTTCAGCACTTGGGTATGCCCCCGGCACTGCCTCAGGAGGAGCCCCACTGGCTCGTCTCGCCATTTACAAAGTCTGCTGGCCGATCCCAGGCCAAACAAAGGTGAAAGGGAACACATGCTATGAAGAAGACATGTTAGCAGCCATAGATGATGCCATTGCTGATGGAGTTCATGTACTTAGCATCTCTATCGGGACTTCTCAACCTTTCACTTATGCCAAAGATGGTATAGCAATTGGAGCACTTCATGCCACCAAGAACAACATTGTAGTGGCGTGCAGCGCTGGGAATTCAGGCCCTGCCCCCTCAACTTTGTCCAACCCTGCACCATGGATCATCACAGTTGGTGCTAGTAGCATAGACCGAGCATTTGTCACTCCTCTTGTTCTTGGAAATGGCATGAAACTCATGGGACAATCCGTAACCCCATACAAGCTGAAGAAAAAGATGTACCCCCTGGTATTCGCAGCAGATGCCGTCGTCCCTGGAGTGCCCAAGAACAATACTGCAGCAAATTGCAACTTTGGTTCCCTTGATCCAAAGAAGGTGAAAGGAAAGATAGTTTTGTGCTTGAGGGGTGGTATGACATTGAGAATTGAAAAGGGCATTGAAGTGAAAAGAGCCGGGGGTGTTGGTTTTATTCTAGGAAACACGCCGGAAAATGGATTTGATCTCCCAGCAGACCCTCACCTTCTTCCTGCAACTGCAGTGAGTTCCGAGGATGTGACTAAAATTCGTAACTACATTAAATCAACAAAGAAACCAATGGCAACCATCATTCCAGGACGGACGGTGTTACATGCTAAACCAGCACCATTCATGGCTTCTTTCATCAGTAGGGGTCCAAATACTATCGATCCTAATATTCTCAAGCCTGACATCACAGGTCCAGGACTCAATATATTAGCAGCATGGAGCGAAGGATCATCCCCTACAAGGTCAGAATTGGATCCCCGAGTGGTGAAGTATAATATTTTCTCTGGAACATCTATGTCTTGCCCTCATGTGGCTGCTGCAGTTGCTCTTCTCAAAGCCATTCACCCTAATTGGAGCAGTGCTGCTATAAGATCTGCTCTCATGACCACGGGTATAGTTAAACAACATTCATAG 1821 0.4635 MRFCDFFLLFLLPLLASCAERKVYIVYFGEHSGQKALHEIEDYHHSYLLSVKASEEEARDSLLYSYKHSINGFAAVLSPHEVTKLSEMDEVVSVFPSQRKKHTLHTTRSWEFVGLEKELGREQLKKQKKTRNLLEKARYGDQIIVGMVDNGVWPESKSFSDEGMGPIPKSWKGICQTGVAFNSSHCNRKLIGARYYLKGYESDNGPLNTTTDYRSPRDKDGHGTHTASTVAGRRVHNVSALGYAPGTASGGAPLARLAIYKVCWPIPGQTKVKGNTCYEEDMLAAIDDAIADGVHVLSISIGTSQPFTYAKDGIAIGALHATKNNIVVACSAGNSGPAPSTLSNPAPWIITVGASSIDRAFVTPLVLGNGMKLMGQSVTPYKLKKKMYPLVFAADAVVPGVPKNNTAANCNFGSLDPKKVKGKIVLCLRGGMTLRIEKGIEVKRAGGVGFILGNTPENGFDLPADPHLLPATAVSSEDVTKIRNYIKSTKKPMATIIPGRTVLHAKPAPFMASFISRGPNTIDPNILKPDITGPGLNILAAWSEGSSPTRSELDPRVVKYNIFSGTSMSCPHVAAAVALLKAIHPNWSSAAIRSALMTTGIVKQHS* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0364 606 MobiDBLite consensus disorder prediction 206 227 - -
Vvi10g0364 606 SUPERFAMILY PA domain 410 470 IPR046450 -
Vvi10g0364 606 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 105 IPR037045 -
Vvi10g0364 606 CDD Peptidases_S8_3 102 599 IPR034197 -
Vvi10g0364 606 ProSitePatterns Serine proteases, subtilase family, serine active site. 565 575 IPR023828 -
Vvi10g0364 606 FunFam Subtilisin-like protease SBT5.3 14 105 - -
Vvi10g0364 606 Pfam Subtilase family 140 599 IPR000209 GO:0006508|GO:0008236
Vvi10g0364 606 CDD PA_subtilisin_like 365 496 - -
Vvi10g0364 606 Pfam PA domain 398 481 IPR003137 -
Vvi10g0364 606 Gene3D - 358 503 - -
Vvi10g0364 606 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vvi10g0364 606 SUPERFAMILY Subtilisin-like 106 599 IPR036852 GO:0004252|GO:0006508
Vvi10g0364 606 Gene3D Peptidase S8/S53 domain 143 600 IPR036852 GO:0004252|GO:0006508
Vvi10g0364 606 FunFam subtilisin-like protease SBT1.5 358 503 - -
Vvi10g0364 606 FunFam Subtilisin-like protease SBT1.5 142 372 - -
Vvi10g0364 606 ProSiteProfiles Serine proteases, subtilase domain profile. 118 606 - -
Vvi10g0364 606 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Vvi10g0364 606 PRINTS Subtilisin serine protease family (S8) signature 564 580 IPR015500 -
Vvi10g0364 606 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Vvi10g0364 606 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 600 IPR045051 -
Vvi10g0364 606 Pfam Peptidase inhibitor I9 23 98 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0364 Vvi-Chr10 3991255 3995439 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0364 16 599 Subtilisin-like Serine Gene Family AT5G45650 65.436 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0364 - - vvi:100252070 1195.65