Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0358 ATGAGGTTTTGTGTTTTCTTTTTGCTTTTCCTGCTTCCTCTCCTGGCCTCATGTGCAGAAAGAAAGGTCTATATAGTATATTTTGGAGGACACAGTGGACAGAAAGCACTTCATGAGATAGAGGATTATCACCACTCGTATCTTCTCTCTGTGAAAGCATCCGAGGAAGAAGCTAGAGATTCTCTCCTCTACAGTTACAAGCACAGCATCAATGGCTTTGCAGCAGTTCTCAGCCCCCAAGAAGCCACAAAGCTTTCGGAGATGGATGAAGTGGTATCAGTATTCCCCAGCCAGCGGAAAAAGCACACCCTCCACACTACAAGGTCATGGGAATTTGTAGGCTTGGAGAAGGGACTGGGAAGAGAACAGTTGAAGAAGCAAAAGAAGACGAGAAATTTATTGGAAAAAGCCAGATATGGTGATCAAATCATAGTTGGGATGGTGGATAATGGTGTATGGCCGGAGTCGAAGAGCTTTAGTGATGAAGGAATGGGACCTATCCCAAAATCATGGAAGGGAATCTGCCAAACTGGAGTTGCTTTCAACTCCTCCGATTGTAACAGGAAGCTGATTGGAGCTCGATACTATCTGAAGGGTTATGAGTCGGACAATGGCCCTCTTAACACCACAACAGATTATAGATCACCACGTGACAAGGATGGCCACGGAACCCACACGGCATCTACGGTTGCAGGGCGAAGGGTTCACAATGTTTCAGCACTTGGGTATGCCCCCGGCACAGCCTCAGGAGGAGCCCCGCTGGCTCGTCTCGCCATTTACAAAGTCTGCTGGCCGATCCCAGGCCAAACAAAGGTGAAAGGGAACACATGCTATGAAGAAGACATGTTAGCAGCCATAGATGATGCCATTGCTGATGGAGTTCATGTACTCAGCATCTCTATCGGGACTTCTACACCTTTCACTTATGCCAAAGATGGTATAGCAATTGGAGCACTTCATGCCACCAAGAACAACATTGTAGTGGCATGTAGCGCTGGGAATTCAGGCCCTGGCCCCTCAACTTTGTCCAACCCTGCACCATGGATCATCACAGTTGGCGCTAGTAGCGTAGACCGAGCATTTGTCACTCCTCTGGTTCTTGGAAATGGCATGAAACTCATGGGAGAATCCGTAACCCCATACAAGCTGAAGAAAAAGATGTACCCCCTGGTATTCGCAGCAGATGTCGTCGTCCCTGGAGTGCCCAAGAACAATACTGCAGCAAATTGCAACTTTGGTTCCCTTGATCCAAAGAAGGTGAAAGGAAAGCTAGTTTTGTGCTTGAGGGGCGGTATTGCATTGAGAATTGAAAAGGGCATTGAAGTGAAAAGAGCCGGGGGTGTTGGTTTTATTCTAGGAAACACGCCGGAAAATGGATTTGATCTCCCAGCAGACCCTCACCTTCTTCCTGCAACTGCAGTGAGTTCCGAGGATGTGACTAAAATTCGTAACTATATTAAATCAACAAAGAAACCAATGGCAACCATCATTCCAGGACGGACGGTGTTACATGCTAAACCAGCACCATTCATGGCTTCTTTCACCAGTAGAGGTCCGAATACAATCGATCCTAATATTCTCAAGCCCGACATCACAGGTCCAGGACTAAATATATTGGCAGCATGGAGCGAAGGATCATCCCCTACAAGGTCAGAATTGGATCCCCGAGTGGTGAAGTATAATATTTTCTCTGGAACATCTATGTCTTGCCCTCATGTGGCTGCTGCAGTTGCTCTTCTCAAAGCCATTCACCCTAATTGGAGCAGTGCTGCTATAAGATCTGCTCTCATGACCACAGCCGGACTTGTAAACAACATTGGCAAGCCAATAACTGATTCATCTGGCAATCCAGCAAACCCTTTCCAATACGGTTCAGGCCACTTCCGACCAACAAAGGCTGCAGATCCCGGTCTAGTATACGACACTACATACACTGACTATCTTCTCTACCTCTGCAATATTGGAGTTAAAAGTCTTGACTCCTCATTCAATTGTCCAAAAGTGTCACCCTCATCCAACAATCTCAACTATCCATCCCTCCAGATCTCCAAACTCAAACGCAAAGTGACCATCACAAGGACCGTCACTAATGTTGGCAGCGCTAGAAGTATATACTTCTCTAGCGTTAAGTCACCAGTGGGATTTTCAGTTAGGGTTGAGCCAAGTATCCTGTACTTTAATCATGTTGGGCAGAAGAAAAGCTTCTGCATAACAGTAGAAGCTAGAAACCCAAAGGCAAGCAAAAAGAATGATGCAGAGGAGTATGCTTTTGGTTGGTATACATGGAATGATGGAATCCATAATGTAAGAAGCCCTATGGCAGTGTCTTTAGCTTAG 2337 0.4621 MRFCVFFLLFLLPLLASCAERKVYIVYFGGHSGQKALHEIEDYHHSYLLSVKASEEEARDSLLYSYKHSINGFAAVLSPQEATKLSEMDEVVSVFPSQRKKHTLHTTRSWEFVGLEKGLGREQLKKQKKTRNLLEKARYGDQIIVGMVDNGVWPESKSFSDEGMGPIPKSWKGICQTGVAFNSSDCNRKLIGARYYLKGYESDNGPLNTTTDYRSPRDKDGHGTHTASTVAGRRVHNVSALGYAPGTASGGAPLARLAIYKVCWPIPGQTKVKGNTCYEEDMLAAIDDAIADGVHVLSISIGTSTPFTYAKDGIAIGALHATKNNIVVACSAGNSGPGPSTLSNPAPWIITVGASSVDRAFVTPLVLGNGMKLMGESVTPYKLKKKMYPLVFAADVVVPGVPKNNTAANCNFGSLDPKKVKGKLVLCLRGGIALRIEKGIEVKRAGGVGFILGNTPENGFDLPADPHLLPATAVSSEDVTKIRNYIKSTKKPMATIIPGRTVLHAKPAPFMASFTSRGPNTIDPNILKPDITGPGLNILAAWSEGSSPTRSELDPRVVKYNIFSGTSMSCPHVAAAVALLKAIHPNWSSAAIRSALMTTAGLVNNIGKPITDSSGNPANPFQYGSGHFRPTKAADPGLVYDTTYTDYLLYLCNIGVKSLDSSFNCPKVSPSSNNLNYPSLQISKLKRKVTITRTVTNVGSARSIYFSSVKSPVGFSVRVEPSILYFNHVGQKKSFCITVEARNPKASKKNDAEEYAFGWYTWNDGIHNVRSPMAVSLA* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0358 778 MobiDBLite consensus disorder prediction 206 227 - -
Vvi10g0358 778 Gene3D - 358 503 - -
Vvi10g0358 778 FunFam subtilisin-like protease SBT1.5 358 503 - -
Vvi10g0358 778 Pfam Peptidase inhibitor I9 23 98 IPR010259 -
Vvi10g0358 778 ProSitePatterns Serine proteases, subtilase family, serine active site. 565 575 IPR023828 -
Vvi10g0358 778 FunFam Subtilisin-like protease SBT5.3 14 105 - -
Vvi10g0358 778 Pfam PA domain 395 481 IPR003137 -
Vvi10g0358 778 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 105 IPR037045 -
Vvi10g0358 778 CDD PA_subtilisin_like 365 496 - -
Vvi10g0358 778 PRINTS Subtilisin serine protease family (S8) signature 564 580 IPR015500 -
Vvi10g0358 778 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Vvi10g0358 778 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Vvi10g0358 778 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vvi10g0358 778 Gene3D - 651 777 - -
Vvi10g0358 778 CDD Peptidases_S8_3 102 600 IPR034197 -
Vvi10g0358 778 SUPERFAMILY Subtilisin-like 106 638 IPR036852 GO:0004252|GO:0006508
Vvi10g0358 778 Pfam Subtilase family 140 626 IPR000209 GO:0006508|GO:0008236
Vvi10g0358 778 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 55 775 IPR045051 -
Vvi10g0358 778 Gene3D Peptidase S8/S53 domain 143 647 IPR036852 GO:0004252|GO:0006508
Vvi10g0358 778 ProSiteProfiles Serine proteases, subtilase domain profile. 116 634 - -
Vvi10g0358 778 Pfam Fibronectin type-III domain 674 775 IPR041469 -
Vvi10g0358 778 FunFam Subtilisin-like protease SBT1.5 142 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0358 Vvi-Chr10 3915070 3919847 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0358 16 778 Subtilisin-like Serine Gene Family AT5G45650 61.905 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0358 - - vvi:100250276 1537.32