Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0356 ATGAAGCTGAAATCATCTGAAGAGATCTGCATTTCTCAAAACCATCTGGCTCAGTTGCAGACAAAATATATGCCTGGGAACAGATACAGTTTTAATTCTTCCACCCCAAGAACAAGATTGGAAAGACTTTTGAGGGAAAGAGAGCTTAGAAAATTCAATCAATCTTTCAATCTTACCAACGAGGTCAAAGATGGGAACAGGGAAGGTGACCCTTTTGGGAATGACTCAGCAAATGAAGGTGACAATGGAGGGGTTCCCAATGAGGAAGAGTTCCTAGAAGGGTTTACAGCAGGAAGAACAGTTGGTGATGCATTTGAAAGGCAGGATGCACGGCCTTCAAAACAACGTTTGTTGGTAGTGGCCAACAGACTGCCGGTGTCTGCAGTTAGGAAGGGTGAGGATTCATGGCAACTAGAGATTAGTGTAGGGGGCCTTGTCAGTGCATTGTTGGGCGTGAAAGAATTTGAGGCCAGATGGATTGGTTGGGCAGGGGTAAACGTACCTGATGAAATCGGACAGAAATCACTGGCTAAAGCTCTAGCAGAAAAGAGGTGCATCCCCGTTTTTCTTGATGAAGAAATAGTTCATCAATACTATAATGGGTACTGTAACAACATGCTGTGGCCTCTTTTCCATTATCTTGGGCTTCCACAAGAGGACCGCCTTGCGACTACCCGCAGTTTTCAGTCTCAATTTGATGCATACAAGAAAGCAAACCAAATGTTTGCTGATGTTGTGAATGAGCATTATCAAAATGGTGATGTCGTTTGGTGCCATGATTACCACCTGATGTTTCTTCCCAAATGTTTGAAAGAATATAACATTGAAATGAAAGTTGGTTGGTTTCTTCACACACCTTTCCCTTCATCAGAAATACATAGGACCCTGCCATCTCGATCAGAGCTGTTGAGATCTGTTCTTGCTGCAGATTTGGTTGGTTTTCACACATATGATTATGCAAGGCATTTTGTTAGTGCTTGCACTCGTATTCTTGGGCTTGAGGGTACACCTGAAGGAGTAGAGGATCAAGGAAAGCTGACTCGTGTGGCTGCGTTTCCTATTGGGATAGATTCTGATCGGTTCATTCGAGCTCTTGAACTTCCTCAAGTCCAGAATCACATAAAAGAGTTGAAAGAGAGATTTGCTGGCAGAAAGGTAGATGCTTTGTATGAAAGCACTTTATTTAGTAAATCCCATTATCTTGACTAA 1209 0.4276 MKLKSSEEICISQNHLAQLQTKYMPGNRYSFNSSTPRTRLERLLRERELRKFNQSFNLTNEVKDGNREGDPFGNDSANEGDNGGVPNEEEFLEGFTAGRTVGDAFERQDARPSKQRLLVVANRLPVSAVRKGEDSWQLEISVGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKSLAKALAEKRCIPVFLDEEIVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNEHYQNGDVVWCHDYHLMFLPKCLKEYNIEMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALELPQVQNHIKELKERFAGRKVDALYESTLFSKSHYLD* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0356 402 MobiDBLite consensus disorder prediction 58 89 - -
Vvi10g0356 402 Gene3D Glycogen Phosphorylase B; 103 376 - -
Vvi10g0356 402 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 108 362 - -
Vvi10g0356 402 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 115 386 - -
Vvi10g0356 402 Pfam Glycosyltransferase family 20 116 385 IPR001830 GO:0003824|GO:0005992
Vvi10g0356 402 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 109 386 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0356 Vvi-Chr10 3850955 3855517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0356 24 386 Trehalose Biosynthesis Gene Families AT1G78580 80.000 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0356 K16055 - vvi:100255459 770