Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0347 ATGGCTGTGGAATCGAAGACGGCGGTGAGGTTCACCTTGGGGAAGCAGTCGTCCCTGGCGCCGGAAAGGGCCCGGGATGAAGCTCTGACCGAAGGTGAGCAGGGAGATGTTGAGGGGATTGATCCCAGGGTCAGGCTGATGTATCTGGCAAATGAGGGCGACTTGGAGGGGCTGCGCGAGCTTTTGGATTCGGGAATGGATGTCAATTTCAGGGATATTGATAATCGGACGGCTCTCCATGTGGCCGCGTGTCAGGGCTTCAGCGATGTGGTTGAGTTTTTGTTGAAGAATGGGGCTGAAATTGACCTCGAAGATCGCTGGGGAAGCACACCCCTTGCAGATGCAATACATTACAAAAACCATGATGTAATCAAACTTCTGGAGAAACATGGTGCACAACATCTGATGGCTCCCATGCATGTAAATAATGCCCGTGAAGTCCCAGAGTATGAAATTGATCCTAAGGAGCTTGATTTTACAAACAGTGTTGACATAACTAAGGGAACCTACCGCATTGCATCATGGCGTGGAATTCAAGTTGCTGTAAAAAGGCTTGGGGACGAAGTGATAATTGATGAGGATAAAGTGAAGGCATTTAGAGATGAGCTTGCATTGCTTCAGAAGATACGACATCCCAATGTAGTCCAGTTTCTGGGTGCTGTAACTCAAAGTAGTCCAATGATGATTGTGACAGAATATTTACCCAAGGGAGATCTTCATGCATTCTTGAAAAGAAAAGGAGCATTAAAAACGGCCACAGCTGTGAAATTTGCGCTTGATATTGCAAGGGGAATGAATTATTTGCATGAGCATAGACCAGAAGCAATAATTCATCGTGATCTAGAGCCTTCAAATATATTGCGGGATGATTCGGGACATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGCTGCTGAAAGTTGCTAATACAGTTAAAGAAGATTACCCTCTAATCTGTCAAGAAACTTCTTGTCGATATTTGGCTCCAGAGGTTTTTAAAAATGAAGCTTATGATACCAAGGTGGATGTTTTTTCATTTGCTCTAATTCTACAAGAGATGATTGAGGGCTGTCCACCTTTCAGTGCAAAGCCAGAAAATGAGGTTCCTAAAGTATATGCTGCACAAGAGCGACCGCCTTTCAGAGCTCCATCCAAGCTTTATTCTCATGGACTTAAAGAGTTGATTGAGGAATGCTGGAATGAGAATCCTACGAAGAGACCAACATTTGGGCAAATACTTACTAGGCTGGACCGCATTTATAACCATCTTGGTCAAAAGAGGCGTTGGAAGGTTAGGCCATTGAAATGTTTTCAGAACCTGGAAGCAATGTGGAAGAAAGATCATTCTGATCTAAGCACCTCCAGCCGTTCATCTCGTCCAAACCGGTAG 1389 0.4471 MAVESKTAVRFTLGKQSSLAPERARDEALTEGEQGDVEGIDPRVRLMYLANEGDLEGLRELLDSGMDVNFRDIDNRTALHVAACQGFSDVVEFLLKNGAEIDLEDRWGSTPLADAIHYKNHDVIKLLEKHGAQHLMAPMHVNNAREVPEYEIDPKELDFTNSVDITKGTYRIASWRGIQVAVKRLGDEVIIDEDKVKAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLHAFLKRKGALKTATAVKFALDIARGMNYLHEHRPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVANTVKEDYPLICQETSCRYLAPEVFKNEAYDTKVDVFSFALILQEMIEGCPPFSAKPENEVPKVYAAQERPPFRAPSKLYSHGLKELIEECWNENPTKRPTFGQILTRLDRIYNHLGQKRRWKVRPLKCFQNLEAMWKKDHSDLSTSSRSSRPNR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0347 462 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 143 424 - -
Vvi10g0347 462 FunFam serine/threonine-protein kinase STY46-like 152 235 - -
Vvi10g0347 462 SUPERFAMILY Protein kinase-like (PK-like) 171 416 IPR011009 -
Vvi10g0347 462 Pfam Ankyrin repeats (3 copies) 46 133 IPR002110 GO:0005515
Vvi10g0347 462 ProSiteProfiles Ankyrin repeat region circular profile. 74 106 - -
Vvi10g0347 462 ProSiteProfiles Protein kinase domain profile. 124 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0347 462 ProSiteProfiles Ankyrin repeat profile. 74 106 IPR002110 GO:0005515
Vvi10g0347 462 Gene3D Phosphorylase Kinase; domain 1 151 234 - -
Vvi10g0347 462 PIRSF ILK 1 440 - -
Vvi10g0347 462 SMART ANK_2a 74 103 IPR002110 GO:0005515
Vvi10g0347 462 SMART ANK_2a 41 70 IPR002110 GO:0005515
Vvi10g0347 462 SMART ANK_2a 107 136 IPR002110 GO:0005515
Vvi10g0347 462 Gene3D - 14 150 IPR036770 -
Vvi10g0347 462 CDD STKc_MAP3K-like 170 416 - -
Vvi10g0347 462 Pfam Protein tyrosine and serine/threonine kinase 164 416 IPR001245 GO:0004672|GO:0006468
Vvi10g0347 462 Gene3D Transferase(Phosphotransferase) domain 1 235 459 - -
Vvi10g0347 462 SUPERFAMILY Ankyrin repeat 45 134 IPR036770 -
Vvi10g0347 462 FunFam Os01g0748600 protein 145 436 - -
Vvi10g0347 462 FunFam Integrin-linked protein kinase family 25 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0347 Vvi-Chr10 3697861 3713226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0347 10 437 MAP Kinase Kinase Kinase AT4G18950 68.372 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Vvi10g0347 PK_Tyr_Ser-Thr 3.7e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0347 - - vvi:100256688 904.82