Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi10g0332 | ATGGCTACTTTTCCAGATATTCATGGGAAGACTCTCTTCTTTGCTTTTATTCTCACGCTGCTCATACTCATGTGCTTCGGTTCCAGCAGCGTTGAAGCCCAAGGTGGTCAGCTTCCTCGTGATGAAGAGGAGGCTCTAGAAGAAATAGCAGAACAAGTGGGGAAAAAGGATTGGAACTTCAGCCTAAACCCTTGTGATGGCAACTCCAACTGGTCCACACCTAACAGGAAGGAAAAGCCATTGTATAACAATACTCTCACCTGCAATTGCTCCTATCCCAACGGTCAATGCCACGTCGTTCAGATATTTCTCAAAGGGCAAGATCTTGCTGGTGTGCTTCCGCCCTCTCTGGCGAAACTGTCTTACCTTAAGATAATTGATTTCACTAGGAACTATCTTAGTGGTAACATACCGCATGAATGGGCTTCTGTGCAATTAGAATATATGTCACTTACTGTGAACAGGTTATCAGGACCAATACCAAGCTTCTTGGGAAACATTACTACTCTGAGATATATGAGTATGGAGAACAACATGTTCTCTGGAACTGTTCCTCCTCAGCTTGGGCAATTGGTCAACTTGGAAAATCTCATTCTTAACGCTAACAATCTCACTGGGGAGTTGCCTCCAGCACTTGCTAATCTAACCAAATTAACAGAATTTCGGATTAGTAGCAACAATTTCACTGGAAAAATACCCAATTTTATTCCTAGTTGGAAACAACTTCAGAAATTAGAGATCCAAGCAAGTGGTCTTGAAGGGCCCATACCTTCTAGCATTTCTGTCTTGAAGAATTTAACTGAATTAAGGATTAGTGATTTACCTGGGGAAGGCTCAAATTTTCCACCTCTAGGAAACATGAAAGGCCTGCAAAAGCTGATGTTGAGAGGCTGTAATATCTTCGGATCAATCCCCAAATATTTAGCAGAGATGACAGAACTGCAAATTTTAGACCTTAGCTTCAACAAGCTGGAAGGAATTGTTCTAAACCTGGAAGGTTTAACACAAATAGAATTCATCCAAACAGATATTTCTTATAACAACTTTTCTAAAAGCTCTATGCCATCTTCTTGTCGAGAAACCCTGAACTTGTTCCGAAGCTTTTCTGAAAGGGGAAAATTAGAATTTGATGAGTGCCTGAACAGTTTTCCATGTCTCAAAGATCAGTATTCACTGCATATAAATTGTGGTGGAGGAAGAACCATCATTGGAGACATAGTCTATGAAGCGGATGAAGACTTAGCAGGTCCATCCAAGTTTGTCCCCACTAGAGATAATTGGGGTTTTAGTAGCACAGGAGACTTTTGGGATCGTGACAGAACCACAAAAAATTATATAGCACAGAATGTATCCATGCTCGGGATGAATGACTCTGAATTGTACACAAGAGCACGACTTTCTCCTCTATCTTTCACTTACTATGGACGCTGCTTAGCAGATGGGACCTATACTGTGAAACTTCATTTTGCAGAGATAGTGATCAGAGACAATAAATCCTTTCATAGTCTTGGAAGACGTATTTTTGATGTTTACATCCAGGAAAAGCTGGAGTTGCAAGATTTTAATATTGTACAAGCAGCACAAGGGGTTGATAAGGTAGTTGTAAGAGAATTTAAAGCAGTCGTAAGGAATAAGACTTTGGAGATCCGATTTCATTGGGCTGGGAAAGGTACAACAGCTGCCCCAGAGGGAGGAACCTATGGTCCTCTCATATCAGCCATTTCTGTAAAAGCTGATTTTGAGCCGTCTTCTGATGGAAAAAAGAAGATATTCATTGCAGTTGGGGCTGTGGCTTTCATGATATTCCTTATTTTAGGTATTCTTTGGTGGAAAGTTTGTTTTGGTGGCAGAATCTCCCGGGAACAAGATCTCGAAGGACTAGATATGCAAACAGGTTCTTTTACCTTAAAACAAATAAAAGCTGCCACCAAAAATTTTGATTTTGCAAACAAGATTGGAGAAGGAGGTTTTGGTCCAGTTTATAAGGGTCTGTTATCCGATGGTACCATAGTTGCAGTGAAACAGCTTTCCTCTATATCAAGGCAAGGAAATCGTGAATTTTTGAATGAGATAGCCATGATTTCTTGTTTGCAACACCCAAATCTGGTGAAACTTCATGGAAGTTGTGTTGAAGGAGATCAACTGCTACTGGTATACGAGTACATGGAAAACAATAGCCTAGCCGGCGCTCTGTTTGGTAAGTATCATTTACTTAATTTGAATACACTTTCTGTTAAGACAAGTAAAATATAG | 2253 | 0.4035 | MATFPDIHGKTLFFAFILTLLILMCFGSSSVEAQGGQLPRDEEEALEEIAEQVGKKDWNFSLNPCDGNSNWSTPNRKEKPLYNNTLTCNCSYPNGQCHVVQIFLKGQDLAGVLPPSLAKLSYLKIIDFTRNYLSGNIPHEWASVQLEYMSLTVNRLSGPIPSFLGNITTLRYMSMENNMFSGTVPPQLGQLVNLENLILNANNLTGELPPALANLTKLTEFRISSNNFTGKIPNFIPSWKQLQKLEIQASGLEGPIPSSISVLKNLTELRISDLPGEGSNFPPLGNMKGLQKLMLRGCNIFGSIPKYLAEMTELQILDLSFNKLEGIVLNLEGLTQIEFIQTDISYNNFSKSSMPSSCRETLNLFRSFSERGKLEFDECLNSFPCLKDQYSLHINCGGGRTIIGDIVYEADEDLAGPSKFVPTRDNWGFSSTGDFWDRDRTTKNYIAQNVSMLGMNDSELYTRARLSPLSFTYYGRCLADGTYTVKLHFAEIVIRDNKSFHSLGRRIFDVYIQEKLELQDFNIVQAAQGVDKVVVREFKAVVRNKTLEIRFHWAGKGTTAAPEGGTYGPLISAISVKADFEPSSDGKKKIFIAVGAVAFMIFLILGILWWKVCFGGRISREQDLEGLDMQTGSFTLKQIKAATKNFDFANKIGEGGFGPVYKGLLSDGTIVAVKQLSSISRQGNREFLNEIAMISCLQHPNLVKLHGSCVEGDQLLLVYEYMENNSLAGALFGKYHLLNLNTLSVKTSKI* | 751 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi10g0332 | 750 | Gene3D | Ribonuclease Inhibitor | 235 | 373 | IPR032675 | - | |
Vvi10g0332 | 750 | SUPERFAMILY | Protein kinase-like (PK-like) | 629 | 736 | IPR011009 | - | |
Vvi10g0332 | 750 | Gene3D | - | 385 | 579 | - | - | |
Vvi10g0332 | 750 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase isoform A | 209 | 275 | - | - | |
Vvi10g0332 | 750 | SUPERFAMILY | L domain-like | 82 | 349 | - | - | |
Vvi10g0332 | 750 | ProSiteProfiles | Protein kinase domain profile. | 646 | 750 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g0332 | 750 | Gene3D | Ribonuclease Inhibitor | 39 | 234 | IPR032675 | - | |
Vvi10g0332 | 750 | Pfam | Protein tyrosine and serine/threonine kinase | 648 | 732 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi10g0332 | 750 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 18 | 738 | - | - | |
Vvi10g0332 | 750 | ProSiteProfiles | Leucine-rich repeat profile. | 313 | 335 | IPR001611 | GO:0005515 | |
Vvi10g0332 | 750 | Gene3D | Phosphorylase Kinase; domain 1 | 616 | 721 | - | - | |
Vvi10g0332 | 750 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase RFK1 | 44 | 208 | - | - | |
Vvi10g0332 | 750 | FunFam | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase | 389 | 579 | - | - | |
Vvi10g0332 | 750 | FunFam | probable LRR receptor-like serine/threonine-protein kinase At1g53430 | 616 | 721 | - | - | |
Vvi10g0332 | 750 | Pfam | Malectin domain | 391 | 574 | IPR021720 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi10g0332 | Vvi-Chr10 | 3439036 | 3455432 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi10g0332 | 16 | 736 | Receptor kinase-like Gene Family | AT1G29750 | 46.275 | 0.0 | 621 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vvi10g0332 | Malectin | 5.8e-38 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi10g0332 | - | - | vvi:104880495 | 1442.56 |