Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0319 ATGACAGGAACGAGGCTCCCAACATGGAAGGAGAGGGAGAACAACAAGCGGAGAGAGAGGAGACGGCGAGCGATCGCCGCGAAGATCTACTCCGGTTTGCGTATGTACGGTAACTATAAACTGCCTAAGCACTGCGACAACAACGAGGTCTTGAAAGCTCTCTGCAACGAGGCCGGTTGGACGGTTGAAGAAGACGGCACCACTTACAGAAAGGGATGCAAACCTGTGGAACGCATGGATATTATGGGTGGCTCAGCATCAGCAAGTCCATGCTCATCATACCAGCCAAGCCCATGTGCCTCCTACAATCCAAGCCCATGTGCCTCCTATAATCCAAGCCCATGTGCCTCCTACAATCCAAGCCCTGCCTCTTCATCTTTCCCAAGCCCTGTCTCATCCCGTTACGCTGCAAATGCGAATGCTAGTGCTGATGCCAATGCCCTCATTCCATGGCTCAAAAACCTCTCATCTGGCTCATCATCAACCTCATCCAAGTTCCCCCACCATCTCTACATCCATGGAGGTTCTATAAGTGCTCCAGTTACCCCTCCATTGAGCTCTCCAACTGCCCGAACTCCACGACTCAAGAATGACTGGGATGATACAACTGGTGGGCCAGGCTGGGCCGGGCAGCGCTACTTTCTGCCTTCTTCCACCCCTCCAAGCCCTGGCCGTCAGGTTCATCCTGATTCAGGATGGTTTGCCGGTATGCAAATTCCCCAAGGTGGGCCAGCATCTCCCACATTCAGCCTTGTCTCAGCAAACCCATTTGGTTTTAAAGAGGAGGTTTTAGCAGGTGGAGGATCTCGAATGTGGACTCCTGGGCAAAGTGGGACATGCTCTCCTGCAGTTGCTGCGGGATCTGATCATACAGCTGATGTTCCAATGGCAGATGGGATTGCAGCTGAGTTTGCATTTGGCAGCAATACAACAGGGTTGGTGAAGCCATGGGAAGGAGAGAGGATCCATGAGGAATGTGGATCCGATGAACTTGAGCTCACCCTTGGGAGCTCTAGAACCAGATAA 1026 0.5253 MTGTRLPTWKERENNKRRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVERMDIMGGSASASPCSSYQPSPCASYNPSPCASYNPSPCASYNPSPASSSFPSPVSSRYAANANASADANALIPWLKNLSSGSSSTSSKFPHHLYIHGGSISAPVTPPLSSPTARTPRLKNDWDDTTGGPGWAGQRYFLPSSTPPSPGRQVHPDSGWFAGMQIPQGGPASPTFSLVSANPFGFKEEVLAGGGSRMWTPGQSGTCSPAVAAGSDHTADVPMADGIAAEFAFGSNTTGLVKPWEGERIHEECGSDELELTLGSSRTR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0319 341 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 104 341 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vvi10g0319 341 MobiDBLite consensus disorder prediction 1 20 - -
Vvi10g0319 341 MobiDBLite consensus disorder prediction 182 203 - -
Vvi10g0319 341 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 156 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0319 Vvi-Chr10 3247886 3251341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0319 2 341 BZR Transcription Factor Family AT1G78700 68.481 1.28e-136 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vvi10g0319 BES1_N 1.2e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0319 - - vvi:100263555 636.336