Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0315 ATGAATTTAAGAAGTTCGATTCTAGGAACAATTGAAGAAGATTGTACATTTGCTTCTCTTAATTTGGAAGAACCTGATGCACCTAGTAAAGAAGAAAAAAGAAAATTGAAAGAAATGGACATCAAGGAACTAATGTCAAAGAGTGAGAACCAGAGAAAATCCATTCATCTAAGCAGGGAATTGCAGAGCAGAACAAAACAGAGGAGCAAAATCAGAGTTCACTCACCAAGAACACCTTCCAAGGTGGAAATTTGCAAAATAAAAGCCCTGGAAGACATGAAGGCCAAAATGAAGATGAAGAAGAAGATTGAGGAGAGAATTCTTGAAGGAAGAACACAAATAGAAAGCTTTGCTGTTGTAAAAAGCTCCCTTGACCCACAGAAGGACTTCAGAGATTCGATGATTGAAATGATCATGGAGAAAGGGATTAGCCAGCCAGAAGAACTCGAGGAACTCTTGGCTTGTTATCTGACATTGAACTCAGATGAATACCATGACCTCATAATCAAGGTCTTCCGGCAGGTATGGTTTGGCTTGAACCGAGCTTATTTTGATCCTGAATTACAGAATGAACATTGCTATGAATGA 588 0.3861 MNLRSSILGTIEEDCTFASLNLEEPDAPSKEEKRKLKEMDIKELMSKSENQRKSIHLSRELQSRTKQRSKIRVHSPRTPSKVEICKIKALEDMKAKMKMKKKIEERILEGRTQIESFAVVKSSLDPQKDFRDSMIEMIMEKGISQPEELEELLACYLTLNSDEYHDLIIKVFRQVWFGLNRAYFDPELQNEHCYE* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0315 195 ProSiteProfiles OVATE domain profile. 119 178 IPR006458 -
Vvi10g0315 195 MobiDBLite consensus disorder prediction 43 75 - -
Vvi10g0315 195 MobiDBLite consensus disorder prediction 43 67 - -
Vvi10g0315 195 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 38 180 IPR038933 GO:0045892
Vvi10g0315 195 Pfam Transcriptional repressor, ovate 123 179 IPR006458 -
Vvi10g0315 195 NCBIfam uncharacterized plant-specific domain TIGR01568 117 180 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0315 Vvi-Chr10 3219089 3219676 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vvi10g0315 Ovate 8.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0315 - - vvi:100243022 362.844