Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi10g0308 | ATGATGTCAAGATCGTATACCAATCTTTTAGATCTAGCTTCCGGGAACTTTCCGCTGATGGGGCAAAGAAAGCGGCTGCCTCGAGTAATGACCGTTCCTGGTGTTATATCAGAGCTTGATGATGATCAAGCTAATAGTGTGACCTCAGATGTTCCATCCTCTATCGTCCAAGATCGTGTAATAATTGTAGCTAATCAGCTTCCAGTAAAAGCTAAGCGCAGGCCGGATAATAAAGGGTGGAGTTTTAGTTGGGATGAGGACTCCCTGTTATTGCAACTTAAAGATGGCTTGCCCGATGATATGGAGGTTTTGTACGTGGGGTCGTTGAGGGTTGATGTTGATTCAAATGAGCAGGATGATGTGTCGCAAGTTTTGTTGGATAGGTTCAAGTGTGTGCCTGCATTTTTACCACAGGATATTTTGTCCAAATTTTATCATGGGTTTTGTAAGCAACAGTTGTGGCCACTTTTTCATTACATGCTTCCCTTCTCGGCAAATCATGGGGGTAGATTTGATAGGTCTTTGTGGGAGGCCTATGTGTCTGCTAATAAGATCTTTTCGCAGAGGGTGATTGAGGTGTTAAACCCTGAAGATGACTATGTTTGGATTCATGATTACCATTTGATGGTGTTGCCGACCTTTTTGCGAAGACGGTTTAACAGATTGAGAATGGGTTTTTTCCTTCATAGTCCATTTCCTTCATCTGAGATATATAGGACCCTACCAGTGAGAGAAGAGATACTTAAGGCACTCTTGAATTCAGACCTTATTGGTTTCCACACTTTTGATTATGCCCGGCATTTCCTTTCTTGTTGTAGTCGGATGTTGGGTTTGGAGTATCAGTCAAAGAGGGGTTATATTGGTTTGGAATATTATGGAAGGACTGTTGGAATAAAGATTATGCCAGTTGGGGTTCACATGGGGCAGATTGAATCTGTGTTGAGATTTGCAGATAAGGAATGGCGGGTGGGAGAGCTTAAACAGCAGTTTGAGGGAAAGACTGTGCTACTGGGTGTTGATGACATGGACATCTTTAAAGGTGTCAATTTGAAGTTGTTGGCAATGGAGCAGATGCTCACACAGCATCCAAAGTGGCAAGGAAGGGCAGTGTTGGTACAGATTGCAAACCCTGCTAGGGGGAGTGGGAGAGATCTCGAGGTGATACAGGCTGAAATACAGGCAAGCTGTAAGAGAATTAATGAAAATTTTGGGCAGCCAGGTTATGAACCGATTGTATTTATTGATAGGCCAGTTTCTCTTAGTGAGAAAGCTGCATTTTACACCATTGCCGAGTGTGTCGTAGTGACAGCTGTCAGGGATGGAATGAACCTTATCCCATATGAGTATATCGTGTCCAGGCAGGGAGTCTCTGGATCTGAATCTGGTTCTGAATCAAGTGGCCCCAAGAAGAGCATGCTAGTGGTATCAGAGTTCATAGGATGCTCTCCTTCGCTGAGTGGTGCCATTAGAGTCAATCCATGGAATGTTGAAGCAACTGCTGAGGCAATGAATGAGGCAATTTCTATGGCTGATGCTGAGAAGCAATTGCGTCACGAGAAGCATTACAGGTATGTTAGTACACATGATGTGGCATATTGGTCGAAAAGTTTTTTCCAGGATATGGAGCGGTCTTGTAAAGACCATTTTAGGAGATGGTGTTGGGGAATTGGGTTGAGCTTCGGTTTCAGAGTTGTAGCCCTCGATCCTAACTTCAGAAAGTTGTCTATTGATTCTATTGTATCTGCATATTCAAGGGCCAAAAATAGGGCCATCCTTTTGGATTATGATGGGACTGTAATGCCTCAGACATCCATCAATAAGACTCCAAGTGAAGATGTTATCTTAATCTTGAACACGCTTTGTAGTGACCCTAGAAATACAGTGTTTGTTGTTAGTGGAAGGGGAAGGGATAGCTTAGGCAAGTGGTTTTCTCCTTGCAACAGGCTTGGAATTGCAGCAGAACATGGATACTTCTTAAGGTGGTCTGTGAATGAAGAATGGGAAATCTGTGGTCAGAGTAATGATTTTGGGTGGATACAGATGGCTGAGCCTGTAATGAAATTGTACACAGAAGCTACTGATGGTTCTTATATTGAAACCAAGGAGAGTGCCTTGGTTTGGCACCATCAGGATGCAGACCCAGGTTTTGGCTCTAGCCAGGCCAAGGAGATGTTAGACCATCTAGAAAGTGTGCTAGCAAATGAACCTGTTGCTGTGAAAAGTGGTCAATTCATTGTAGAAGTGAAGCCACAGGGCATCAGTAAAGGTGTGGTTGCGGAAAAGATCTTCACTTCAATGGCAGAGAGGGGAAGGCAGGCTGATTTTGTGTTGTGTGTAGGTGATGACAGATCTGATGAGCATATGTTTGAAATCATTGGTAATGCAGTATCGAGTGGGATCCTCTCCTCTAATACATCAGTTTTTGCCTGCACGGTTGGACAGAAACCAAGTAAAGCCAAGTACTATTTGGATGACACAACTGAGGTCATAAACATGCTTGATGCTCTTGCTGATGCTTCAGACCCTTCCCCATCTCCCGAACTTGAAGCAAGCTCTCCTTGA | 2562 | 0.4372 | MMSRSYTNLLDLASGNFPLMGQRKRLPRVMTVPGVISELDDDQANSVTSDVPSSIVQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPDDMEVLYVGSLRVDVDSNEQDDVSQVLLDRFKCVPAFLPQDILSKFYHGFCKQQLWPLFHYMLPFSANHGGRFDRSLWEAYVSANKIFSQRVIEVLNPEDDYVWIHDYHLMVLPTFLRRRFNRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGVHMGQIESVLRFADKEWRVGELKQQFEGKTVLLGVDDMDIFKGVNLKLLAMEQMLTQHPKWQGRAVLVQIANPARGSGRDLEVIQAEIQASCKRINENFGQPGYEPIVFIDRPVSLSEKAAFYTIAECVVVTAVRDGMNLIPYEYIVSRQGVSGSESGSESSGPKKSMLVVSEFIGCSPSLSGAIRVNPWNVEATAEAMNEAISMADAEKQLRHEKHYRYVSTHDVAYWSKSFFQDMERSCKDHFRRWCWGIGLSFGFRVVALDPNFRKLSIDSIVSAYSRAKNRAILLDYDGTVMPQTSINKTPSEDVILILNTLCSDPRNTVFVVSGRGRDSLGKWFSPCNRLGIAAEHGYFLRWSVNEEWEICGQSNDFGWIQMAEPVMKLYTEATDGSYIETKESALVWHHQDADPGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGISKGVVAEKIFTSMAERGRQADFVLCVGDDRSDEHMFEIIGNAVSSGILSSNTSVFACTVGQKPSKAKYYLDDTTEVINMLDALADASDPSPSPELEASSP* | 854 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi10g0308 | 853 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 588 | 705 | - | - | |
| Vvi10g0308 | 853 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 313 | 526 | - | - | |
| Vvi10g0308 | 853 | NCBIfam | trehalose-phosphatase | 586 | 837 | IPR003337 | GO:0003824|GO:0005992 | |
| Vvi10g0308 | 853 | SUPERFAMILY | HAD-like | 589 | 837 | IPR036412 | - | |
| Vvi10g0308 | 853 | Pfam | Trehalose-phosphatase | 592 | 826 | IPR003337 | GO:0003824|GO:0005992 | |
| Vvi10g0308 | 853 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 718 | 849 | - | - | |
| Vvi10g0308 | 853 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 52 | 311 | - | - | |
| Vvi10g0308 | 853 | Gene3D | - | 588 | 703 | IPR023214 | - | |
| Vvi10g0308 | 853 | Gene3D | - | 717 | 845 | IPR023214 | - | |
| Vvi10g0308 | 853 | NCBIfam | HAD-IIB family hydrolase | 591 | 796 | IPR006379 | - |
Showing 1 to 10 of 17 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi10g0308 | K16055 | - | vvi:100265140 | 1663.28 |
Showing 1 to 1 of 1 entries