Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0282 ATGGCAGACAGGCAGAGCAAGGAGAACACAAGCAAAAGGAAGAACGGGGAGAACCAATCTTTGCTTCTGGGGCGGTACGAGATCGGGAAGCTTCTGGGGCATGGGACATTCGCCAAGGTCTACCACGCCAGGAACGTCGGATCCAACGAGAGCGTGGCCATCAAAGTCATCGACAAGGAGAAGATCCTCAAAGGCGGTTTGATCGCACATATCAAGCGCGAGATCTCCATACTCCGCCGCGTTCGCCATCCCAACATCGTTCAATTGTTTGAAGTCATGGCCACCAAGGCTAAGATCTACTTCGTCATGGAGTACGTCAGGGGCGGAGAGCTCTTCAATAAGGTCGCCAAAGGCCGCCTCAAGGAGGAGGTCGCTCGCAAGTATTTCCAGCAGTTGATCTCCGCCGTCGGCTTCTGCCACGCCAGAGGGGTCTACCACCGCGACCTCAAGCCCGAGAATCTCTTACTGGACGAAGCCGGTGACCTCAAAGTCTCCGATTTTGGGCTTAGCGCTGTCTCTGATCAGATGAGGCAGGATGGCCTGTTCCACACCTTTTGTGGGACTCCGGCGTATGTGGCACCTGAGGTTTTGGCCCGGAAGGGCTATGACGCATCCAAGGTTGATATATGGTCGTGCGGTGTGATACTCTTCGTCTTGATGGCTGGGTATCTCCCTTTCCATGATCAGAACATCATGGCCATGTACAAGAAAATCTACAAGGGTGAATTCCGATGCCCTCGGTGGTTTTCGCCGGAGCTCGCTCGGCTTCTTACTCGGCTCCTCGATACGAACCCGGAAACCAGAATTACAATTCCGGAGATTATGGAGAATCGGTGGTTTAAGAAAGGTTTTAAACATATTAAATTTTACATTGAGGATGATACGCTTAGACTCTGTAATGCTGAGGAGGCTGAGGATGATGTGGAGTCTTTGTCGGATCAATCTATGTCAGAGTCGGAGTCGGAGTTGGAGACTCGGAGGAGGCTTTCTACATTGCCAAGACCGGCGAGTTTGAATGCATTTGATATTATATCATTTTCACCAGGTTTCGATCTCTCTGGATTGTTTGAGGAGGGAGGTGGAGACGCGCGATTTGTGTCGGGTGCACCTGTATCGAAGATTATATCAAAATTAGAGGAGATTGCCAAGGTGGTGAGCTTTACAGTGAGGAAGAAGGATTGTAGGGTGAGCTTAGAGGGATCCAGAGAGGGGGTGAAGGGGCCATTAACGATTGCAGCTGAGATTTTTGAGTTAACGCCCTCATTGGTGGTGGTGGAAGTTAAGAAGAAAGGAGGCGACAAAGGGGAGTATGAGGAGTTCTGTAATCGTGAATTAAAACCCGTGTTGCAGAACCTTGTTGATGACTCTGCTGCTTCTTCACATTTTCAAAACTCCTTGCACAAAGGAGAGTGTGGGCAACTTTCTAATCTGGAATTGGAGTCTGGATTGAAGAACCTTGTGGTGGATGACTCTGCTTCTACACCACATTTGCCCTCAGATACTGAATAG 1509 0.499 MADRQSKENTSKRKNGENQSLLLGRYEIGKLLGHGTFAKVYHARNVGSNESVAIKVIDKEKILKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDEAGDLKVSDFGLSAVSDQMRQDGLFHTFCGTPAYVAPEVLARKGYDASKVDIWSCGVILFVLMAGYLPFHDQNIMAMYKKIYKGEFRCPRWFSPELARLLTRLLDTNPETRITIPEIMENRWFKKGFKHIKFYIEDDTLRLCNAEEAEDDVESLSDQSMSESESELETRRRLSTLPRPASLNAFDIISFSPGFDLSGLFEEGGGDARFVSGAPVSKIISKLEEIAKVVSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKGEYEEFCNRELKPVLQNLVDDSAASSHFQNSLHKGECGQLSNLELESGLKNLVVDDSASTPHLPSDTE* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0282 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Vvi10g0282 502 ProSiteProfiles Protein kinase domain profile. 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0282 502 Gene3D Transferase(Phosphotransferase) domain 1 16 334 - -
Vvi10g0282 502 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Vvi10g0282 502 Gene3D Kinase associated domain 1, KA1 335 454 - -
Vvi10g0282 502 FunFam Non-specific serine/threonine protein kinase 335 453 - -
Vvi10g0282 502 MobiDBLite consensus disorder prediction 308 328 - -
Vvi10g0282 502 SMART serkin_6 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0282 502 FunFam Non-specific serine/threonine protein kinase 17 105 - -
Vvi10g0282 502 CDD CIPK_C 339 450 - -
Vvi10g0282 502 SUPERFAMILY Protein kinase-like (PK-like) 22 331 IPR011009 -
Vvi10g0282 502 ProSiteProfiles NAF domain profile. 333 357 IPR018451 GO:0007165
Vvi10g0282 502 CDD STKc_SnRK3 25 279 - -
Vvi10g0282 502 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g0282 502 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 447 - -
Vvi10g0282 502 FunFam Non-specific serine/threonine protein kinase 16 327 - -
Vvi10g0282 502 Pfam NAF domain 335 391 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0282 Vvi-Chr10 2805503 2807011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0282 1 502 CBL-interacting serine-threonine protein kinases AT4G18700 77.120 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vvi10g0282 Pkinase 2.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0282 - - vri:117923981 941.028