Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0280 ATGAAAGCAGAAGAAAAGATGAAATCCCCAGTTGAGGAGAGGTTCATCGAGTTTTATGAGAAGTGGATGTGTCAGCTAGAAGAAAATCTTCAACGACTTCTCAAAGTGTCCAGGGAGATTCCTCATCGCACAGAGAGAGAAGCACTGGTGTCCAGAGTTACAACCCACCTCAAAGAATACTACAACGCGAAGTGGGCTGCAGCGCACGAGGATGTTCTGGCCTTCTTTTCGCCAGTATGGCTGAGTCCTTTAGAGAATGCTTACCTCTGGGTAACGGGTTGGAAGCCGTCCACAGCTTTTCGTCTGATTGAATCACTGAGGCAAACAGGGGTCCCTGGGGAGAGCCTGGCGGAGATGTCGGAGGAGCAGATGAAGAAAGTGGAGGAGCTGAGAGTGAGAATAAGGCTGGAAGAGGAGAAGGTGGAGAGGGAGATGGAGAGGCAACAGGTGGCCTTGGCTGATCGGAAGATGGTTGAGCTGGCTCGAGCGGCTAGCCGAGTCAGCAATGGTGGACTGGCGAGTGAGGAGAATGGGCTGGTGGAGGTGGCATTGAAGGGGTTGTTATCCGGGTTGGAGCGAGTTATGAAAGCCGCAGACTGTGCGAGGCTCAAGACACTGAAAGGGATTTTGGAAGTGTTAAGCCCTTTACAGTGTGTCGACTTCTTGGCTGCAACTTTGATGTTTCATGTTAATCTCAGAAAATGGGGAATAAAGAGAGCTGGTCCCCATGAGATGTAG 738 0.5081 MKAEEKMKSPVEERFIEFYEKWMCQLEENLQRLLKVSREIPHRTEREALVSRVTTHLKEYYNAKWAAAHEDVLAFFSPVWLSPLENAYLWVTGWKPSTAFRLIESLRQTGVPGESLAEMSEEQMKKVEELRVRIRLEEEKVEREMERQQVALADRKMVELARAASRVSNGGLASEENGLVEVALKGLLSGLERVMKAADCARLKTLKGILEVLSPLQCVDFLAATLMFHVNLRKWGIKRAGPHEM* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0280 245 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 14 241 - -
Vvi10g0280 245 Coils Coil 117 156 - -
Vvi10g0280 245 ProSiteProfiles DOG1 domain profile. 12 242 IPR025422 GO:0006351|GO:0043565
Vvi10g0280 245 Pfam Seed dormancy control 33 104 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0280 Vvi-Chr10 2784201 2784938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0280 19 233 bZIP Transcription Factor Family AT5G06960 26.941 3.66e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0280 - - vvi:100256671 456.447