Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0263 ATGGTGGATTCCATGAAGAAAGTGGCGAAGCTGGACGTGGAATTGACCGTGGAGGAGCGGAACCTGCTCTCGGTTGGCTTTAAGAACGTGATCGGCGCTCGGAGGGCTTCCTGGAGGATTCTTTCATCGATCGAGCAGAAGGAGGAAGCTAAAGGGAACGATCAGAATGCGAAGCGGATCAAGGAGTACAGGCAAAAGGTAGAATCGGAGCTTTCCGGAATTTGCAGTGAAATTATGACTGTTATTGATGAGCATCTCATTCCATCTTCTTCGGCCGGTGAATCTACCGTTTTTTACTACAAAATGAAAGGCGACTATTATCGGTATTTGGCGGAGTTTAAGTCTGGCAACGAGAAGAAAGAGGCTGCTGATCAGTCACTGAAAGCTTATCAGACAGCTTCTACGACAGCAGAGGCTGATTTATCTCCCACACATCCCATTCGACTGGGTTTGGCCTTGAACTTCTCTGTTTTTTACTATGAAATTATGAACTCCCCTGAAAGGGCCTGCCACCTCGCAAAGCAAGCTTTTGATGAAGCTATCTCAGAGTTGGATACTCTGAATGAGGAGTCTTACAAGGATAGCACATTGATTATGCAACTTCTGAGGGACAACCTCACCTTGTGGACTACTGACATCCCAGGGGATGATGAAGAGAGCTGGAAGCTGGAAACCTCTGCTAGGGCTGGTGGGAATGAAAACGCAGAGTGA 711 0.474 MVDSMKKVAKLDVELTVEERNLLSVGFKNVIGARRASWRILSSIEQKEEAKGNDQNAKRIKEYRQKVESELSGICSEIMTVIDEHLIPSSSAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSLKAYQTASTTAEADLSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTTDIPGDDEESWKLETSARAGGNENAE* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0263 236 PANTHER 14-3-3 PROTEIN 1 212 IPR000308 -
Vvi10g0263 236 Gene3D - 1 223 IPR036815 -
Vvi10g0263 236 Pfam 14-3-3 protein 1 210 IPR023410 -
Vvi10g0263 236 SUPERFAMILY 14-3-3 protein 2 218 IPR036815 -
Vvi10g0263 236 Coils Coil 170 190 - -
Vvi10g0263 236 PIRSF 14-3-3 1 222 IPR000308 -
Vvi10g0263 236 PRINTS 14-3-3 protein zeta signature 63 87 IPR000308 -
Vvi10g0263 236 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Vvi10g0263 236 PRINTS 14-3-3 protein zeta signature 183 212 IPR000308 -
Vvi10g0263 236 PRINTS 14-3-3 protein zeta signature 129 155 IPR000308 -
Vvi10g0263 236 PRINTS 14-3-3 protein zeta signature 94 116 IPR000308 -
Vvi10g0263 236 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Vvi10g0263 236 FunFam 14-3-3 gamma 1 1 220 - -
Vvi10g0263 236 MobiDBLite consensus disorder prediction 217 236 - -
Vvi10g0263 236 SMART 1433_4 1 223 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0263 Vvi-Chr10 2568597 2571862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0263 1 236 14-3-3 family AT2G42590 79.583 2.43e-137 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0263 K06630 - vvi:100244643 466.077