Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0254 ATGTCTCCTCTTCAACAACCACCAACCCTCTCTGATTCTTTTTCTTCTTCTTCTGCTTCTGCGTCTGCTTCTGCTTCCTGGTTCTTTCCCTACCCTAAGCTCCGGTTCTTCACCCGCATACGCCGCTTCCTCCGCTCTAAATCTTTCTCCAAACGCTCTTCTCCCTCTGCCCGCTTCGAGGACGAGACGGTCATTCAAGGGATGGGGGAGGAGGAGGAGTCGTTGGGGTTGCAGAGATCGGTGAAGAGGCTTCACTTTGGGAGCTGGGAGGAGAAGGAGGTTGCCGCTATGGAGATCAGGAGACTCGCCCAGGAAGATGTCAAGACCAGGAAGTCGCTGGCGGAGCTCGGCGTTGTACCGCCCTTGGTGGCGATGGTTGTTTCGCCTGTCGTCGGGCGCCGGAGGTTGGCGGTTCAGACTTTGATCGAGCTCGCTAATGGAACATACACGAACAAGGCCCTCATGGTGGAAGCAGGACTCCTATCAAACCTACCACAAAACACAGACACCATAGATGAGTCAACAATGCATGAATTCGCACGGCTCCTGCTGTCGATATCTTTTCTAACCAACACCCAATTCCCTCTCAATTCAACCGAAATTCTCCCATTTCTTGTGGCCATTCTTGAGTCGGGTTCAAGCATTGAAACCAAAGAGTCATGTATATGCACTCTGTACAATCTCTCTGCCGTGTTAGACAATTCTGGGCCTTTGGTCAATGGTGGGGTGGTGCAGTCTCTTTTGAGGTTGGTATCAGTAAAGGAAGTCTCCGAGAAAGCACTAGCCACACTAGGGAATTTGGTTGTGACCATGATGGGGAAAAAGGCAGTGGAGAATAGTACATTGGTGCCTGAGAGTTTGATAGAGATCATGACATGGGAGGACAAGCCCAAGTGCCAAGAACTGTCTGCATACATTCTGATGATCCTAGCTCATCAAAGCTCAGTACAACGACAAAAAATGGCTAAGGCAGGGATTGTCCCTGTGATGCTTGAAGTGGCCCTATTGGGAAGTCCTCTAGCTCAAAAAAGAGTACTAAAACTATTACAGTGGTTCAAAGACGAGCGGCAAACAAGAATGGGGCCTCATTCCGGGCCACAGGCCGGGAGGTATGTGATGGGTTCGCCCATGAACCAGAGGGAGACGCTTGAAGGAAAGAAACTGATGAAGACGATGGTAAAGCAAAGTCTAAATAAGAATATGGAGATGATTACACGACGGGCTAATGCTGCAACCGCTGCTTCCACGCTCAAGACCTTGGTTATCAGCACAAGTTCTAAGAGCTTGCCTTACTAG 1296 0.4992 MSPLQQPPTLSDSFSSSSASASASASWFFPYPKLRFFTRIRRFLRSKSFSKRSSPSARFEDETVIQGMGEEEESLGLQRSVKRLHFGSWEEKEVAAMEIRRLAQEDVKTRKSLAELGVVPPLVAMVVSPVVGRRRLAVQTLIELANGTYTNKALMVEAGLLSNLPQNTDTIDESTMHEFARLLLSISFLTNTQFPLNSTEILPFLVAILESGSSIETKESCICTLYNLSAVLDNSGPLVNGGVVQSLLRLVSVKEVSEKALATLGNLVVTMMGKKAVENSTLVPESLIEIMTWEDKPKCQELSAYILMILAHQSSVQRQKMAKAGIVPVMLEVALLGSPLAQKRVLKLLQWFKDERQTRMGPHSGPQAGRYVMGSPMNQRETLEGKKLMKTMVKQSLNKNMEMITRRANAATAASTLKTLVISTSSKSLPY* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0254 431 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 33 431 - -
Vvi10g0254 431 Coils Coil 394 414 - -
Vvi10g0254 431 Gene3D - 42 415 IPR011989 -
Vvi10g0254 431 SUPERFAMILY ARM repeat 81 352 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0254 91 364 U-box Gene Family AT1G67530 28.269 8.06e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0254 - - vvi:100246305 767.303