Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0228 ATGGGTTCTGGAGATTGGTTTAAGGCAATACTTAGCTCAAAGAAAGTGAAAGGTGACAATTCAAGAAAAACGAAGGGAACTTCAACTGATGCAAAATCAAATGGTTTCAAATGGAGGAGCCGCACTCTGAAAGGGTCTACTGGTTTTTCCTATGGTTCTACTAGTGGAAATCCTGGGGTTCTTGGTATTCCAGTTGAGGATATAGCTGCAACTCGGATTCAGACTGCATTCCGGGCATTTATGGCTAGGAAAACTTTACGACGTTTAAAAGGGATAGTAAGGTTACAGAAACTGACCCAGGGCGATTGTGTTAGAAAGCAAGCTTCGACTACATTGAGCTATCTTAGCTCATGGAGCAGGATACAGACCCAGATTAGAGCTCGCCGACTCTGTATGGTTACAGAAGGCCGGATTAGACAGAAGAAATTAGAGAATCAATTAAAACTTGACGCAAAGCTTCATGATCTGGAGGTGGAATGGTGTGGAGGTCCTGAAACAATGGAGGAAATTCTTGCAAGGATATATCACAGGGAAGAAGCAGCAGTAAAGCGGGAGCGAGCACTGGCATATGCCTTCTCTCATCAGTGGAGGGCTAACTCTGGTCAGAACCAAGGGCCAAATAAATCTGGACTTAGCAAAGCTAATTGGGGTTGGAGCTGGATGGAACGTTGGATTGCAGCTCGCCCATGGGAAAGCCGAGTCCACATAAGCCCAAAGAAAGCACAGAGTAGGCAGAAAAACAAGGTTGGTAAAAACATAATCTCACCAACAACAAAAGTACCAGTTACAGTTAATCCTAATGGGAAAGGAACCACAAAGGCCAGAAGATTATCCTACCCATCTGCTGAAAAACCTGCTGCACGAGATGGGAACATTAAACCTGAAGAAGTAAATGCTAAAGAAGAACAGCCAGGACCTTAG 921 0.443 MGSGDWFKAILSSKKVKGDNSRKTKGTSTDAKSNGFKWRSRTLKGSTGFSYGSTSGNPGVLGIPVEDIAATRIQTAFRAFMARKTLRRLKGIVRLQKLTQGDCVRKQASTTLSYLSSWSRIQTQIRARRLCMVTEGRIRQKKLENQLKLDAKLHDLEVEWCGGPETMEEILARIYHREEAAVKRERALAYAFSHQWRANSGQNQGPNKSGLSKANWGWSWMERWIAARPWESRVHISPKKAQSRQKNKVGKNIISPTTKVPVTVNPNGKGTTKARRLSYPSAEKPAARDGNIKPEEVNAKEEQPGP* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0228 306 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Vvi10g0228 306 MobiDBLite consensus disorder prediction 258 306 - -
Vvi10g0228 306 MobiDBLite consensus disorder prediction 258 274 - -
Vvi10g0228 306 MobiDBLite consensus disorder prediction 288 306 - -
Vvi10g0228 306 PANTHER IQ-DOMAIN 5-RELATED 1 254 - -
Vvi10g0228 306 MobiDBLite consensus disorder prediction 17 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0228 Vvi-Chr10 2105797 2110717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0228 1 282 IQD Protein Family AT2G33990 48.944 1.35e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0228 - - vvi:100258909 615.92