Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0208 ATGCTTAAATGTTCAACCAACACAACCAAACTTCCCCGCCTATTTAAGAAGAAATGGTCTGCGGAGTCTCGTCACAGCCCCAGAAACTACAGCACCCTAGCTTTCTTTCTACTCCATCAAACTTCATTTTCTCTTCCTCAAAAATTCATCAAACAGTTCAGTTACAGTGCTGATATGGTGATGAGGATGAGGTTGGCATTGCTGGTACTTTTCTCTCTAGCTGTCACGCCATTGCTGGCTCGAGCTGTGGACATCCATCAGCTGAGGCAGTTGGCAGCTCGGAACAATGTGACGTGCATCTTGGTGTTTGGGGATTCCAGCGTTGATCCCGGAAACAACAACCAACTTGATACTATGATGAAGGGAAACTTCCCTCCATATGGGAAGAACTTCCTCAACGGCCGCCCCACGGGGAGGTTCAGTAATGGAAGACTGGCCACTGACTTCATTGCGGAGGCATTGGGTTACAGAAACATAATTCCAGCCTTTCTTGACCCACACATACAGAAGGCAGATCTGTTACATGGAGTTAGTTTTGCATCATCTGCTTCCGGTTACGATGACCTCACCGCCAATCTCTCGAATGTGTTCCCAGTTTCCAAACAGTTGGAGTATTTCCTGCATTACAAGATCCACCTGAGGCAACTGGTGGGAAAGAAGAAGGCAGAGGAAATACTCGGAAGAGCACTATTCGTTATGAGTATGGGCACAAATGACTTCCTCCAAAACTACTTCCTGGAACCCACTCGCTCGGAGCAGTACACTTTGGAAGAATATGAGAATTACTTGATCTCTTGCATGGCTCATGACATTGAGGAGATGCATAGACTAGGCGCTAGAAGACTGGTGGTAGTTGGGATACCCCCATTGGGGTGCATGCCACTAGTGAAGACACTAAAGGACGAGACAAGCTGTGTGGAAAGTTACAACCAAGCAGCCGCCTCATTCAATTCTAAGATCAAAGAAAAATTGGCCATCTTAAGAACATCCTTAAGGTTAAAGACTGCATATGCAGATATATATGGGACGGTAGAACGAGCGATGAACAACCCCAAACAATACGGTTTTACGGTGACAACAAAGGGGTGTTGCGGGTCGGGGACGGTCGAATATGCGGAGTCATGCAGGGGGTTGAGCACCTGTGCAGATCCAAGCAAGTATCTGTTCTGGGATGCTGTTCATCCCTCAGAAAACATGTACAAAATTATAGCAGATGATGTTGTGAATTCTCTTGACCAGGATCTCTTGCTCTAA 1254 0.4649 MLKCSTNTTKLPRLFKKKWSAESRHSPRNYSTLAFFLLHQTSFSLPQKFIKQFSYSADMVMRMRLALLVLFSLAVTPLLARAVDIHQLRQLAARNNVTCILVFGDSSVDPGNNNQLDTMMKGNFPPYGKNFLNGRPTGRFSNGRLATDFIAEALGYRNIIPAFLDPHIQKADLLHGVSFASSASGYDDLTANLSNVFPVSKQLEYFLHYKIHLRQLVGKKKAEEILGRALFVMSMGTNDFLQNYFLEPTRSEQYTLEEYENYLISCMAHDIEEMHRLGARRLVVVGIPPLGCMPLVKTLKDETSCVESYNQAAASFNSKIKEKLAILRTSLRLKTAYADIYGTVERAMNNPKQYGFTVTTKGCCGSGTVEYAESCRGLSTCADPSKYLFWDAVHPSENMYKIIADDVVNSLDQDLLL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0208 417 Pfam GDSL-like Lipase/Acylhydrolase 100 406 IPR001087 GO:0016788
Vvi10g0208 417 CDD SGNH_plant_lipase_like 98 409 IPR035669 -
Vvi10g0208 417 Gene3D SGNH hydrolase 84 415 IPR036514 -
Vvi10g0208 417 PANTHER GDSL ESTERASE/LIPASE EXL3 69 407 - -
Vvi10g0208 417 FunFam GDSL esterase/lipase APG 89 412 - -
Vvi10g0208 417 SUPERFAMILY SGNH hydrolase 229 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0208 Vvi-Chr10 1850027 1851972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0208 92 415 Pollen Coat Proteome AT1G75910 33.939 1.18e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0208 - - vvi:100246932 717.998