Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0197 ATGATGGGGAAGGGTTCCAAGAGCAATTGCAAGTCGGCGTCCCACAAGATGTTCAAGGACAAGGCCAAGAACCGTGTTGATGATCTACAGGGGATGTTCACGGATCTGCAGTCTGCGAGGAAGGAGAGCCGATCGGTGGATGTCGCGGTCCTTGAGGAGCAGCTTCATCAGATGCTTCGTGAGTGGAAAGCCGAACTCAACGAACCCTCTCCCGCATCTTCTCTACAAGGCGGTAGTCTGGGGTCGTTTTCCTCGGACATTTGCCGGCTGTTGCAGCTTTGTGAAGAGGAGGACGATGCCACTAGTGCGTTAGCTGATGGGGCAGTGCCCAAACCTGAGCCTGATGCTCAAGGCCATCAAATTGGAGCTAGTGTGCTTTTCCAAGAGCGCTATAATAAGGGCCCACAGGAGCATGGCTTTCAATTGGTGGATCAATGCAAAATTTCTCCTTCAGGTGCTCACAATATGGGAGTTCACAATTTGGAAGGAGCTACTCAGTTGGACTATCGTCAGTTTGATTTGCAACAAGACTTTGAGCAAAACTTCTTTGCTGGTTATGATGGGACTGGTCTGTGTGGAGAGGATGCTATGCCTCATATTTCTAGCTTTTTGCCAAGTATTTGCCTTCCACCTTCTGCATTCTTGGGGCCAAAATGTGCACTCTGGGATTGCCCCAGGCCAGCTCAAGGGATGGATTGGTGTCAAAACTATTGCAGCAGCTTTCATGCTACTCTGGCATTGAGTGAAGGCCCTCCTGGTATGACCCCAGTTCTACGACCTGGGGGCATAGGCCTGAAGGATGGTCTGCTTTTTGCTGCTCTTAGTGCAAAGGTGCAAGGAAAAGATGTTGGTATCCCAGAATGTGAAGGGGCTGCAACTGCAAAATCCCCATGGAATGCTCCTGAGCTATTTGATCTGTCAGTTCTTGAGGGTGAAACAATTAGGGAATGGCTTTTTTTTGACAAGCCTCGAAGAGCATTTGAGAGTGGAAATAGAAAGCAGAGGTCATTGCCAGATTATAGTGGGCGTGGTTGGCATGAGTCAAGGAAGCAAGTGATGAATGAATATGGGGGACTGAAAAGATCTTACTACATGGATCCGCAACCTCTGAACCATTTTGAGTGGCACCTTTATGAATATGAAATCAGTAAGTGTGATGCTTGTGCCTTGTATAGGTTGGAACTGAAGCTTGTTGATGGGAAGAAGAGTTCCAAAGCAAAAGCAACAACTGATTCAGTGGCTGATCTGCAGAAGCAGATGGGAAGGCTTACTGCTGAGTTTCCCTTAGATAACAAGCGCTCTGTTAAAGGAAGGACAAAAATTAATATGAAGGATGGTGTTGGAGATGTTTATTCTACTCCAAATCGGGTAGGACCTCCAAATCAACAAGGTGATTATGGGGTAGGAGGACCTTACGATTATCTTGTGGAGAATTTAGGTGACTATTATTTGACATGA 1458 0.4705 MMGKGSKSNCKSASHKMFKDKAKNRVDDLQGMFTDLQSARKESRSVDVAVLEEQLHQMLREWKAELNEPSPASSLQGGSLGSFSSDICRLLQLCEEEDDATSALADGAVPKPEPDAQGHQIGASVLFQERYNKGPQEHGFQLVDQCKISPSGAHNMGVHNLEGATQLDYRQFDLQQDFEQNFFAGYDGTGLCGEDAMPHISSFLPSICLPPSAFLGPKCALWDCPRPAQGMDWCQNYCSSFHATLALSEGPPGMTPVLRPGGIGLKDGLLFAALSAKVQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEYGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKSSKAKATTDSVADLQKQMGRLTAEFPLDNKRSVKGRTKINMKDGVGDVYSTPNRVGPPNQQGDYGVGGPYDYLVENLGDYYLT* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0197 485 MobiDBLite consensus disorder prediction 1 21 - -
Vvi10g0197 485 PANTHER TRANSCRIPTION FACTOR VOZ1 2 480 IPR039277 GO:0006355|GO:0048578
Vvi10g0197 485 Coils Coil 19 39 - -
Vvi10g0197 485 Coils Coil 406 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0197 Vvi-Chr10 1754574 1757625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0197 1 484 VOZ-9 Transcription Factor Family AT1G28520 70.683 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vvi10g0197 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0197 - - vvi:100243518 992.26