Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0194 ATGGATCACATTAATGGCCAGGGAAGGAGTGAATTATTTGAAGCTCAATCTTTCATCTACAAGCATGTATTCAGCTTCATGGATTCCATGTCACTTAAATGTGCAGTTCAGCTAGGCATACCGGACGCAATCCACAACCATAACCAGCCAATTACTCTTCCTGAGTTGGCCTCCGCTATCCAAGTTCCCCCAGAGAAGACCAGCCGCTTGCACCAGCTCATGCGTTTACTGGTGCACTCTGGTTTTTTTGCCATGCAGAAAGTTGATGAAAATCAAGAAGGGTATGTTCTTACGCCCCCTTCTAGGCTCCTCGTTAAAGGTAACGCTACCAGCTTGGCACCGATTGTTCTAGGAATGCTAGATCCTGTTCTAGTGACCCCATGGCATTTCTTGGGGAGTTGGTTGCAAGGGAGCAGCCTCACTGCGTTTGAGGCTGCCCATGGGATGGACCTCTGGAACTATGGGAACCAAAATCCGGAATTTTTCAGTTTAATAGGTGAGATTATGGCAACTGATTCTCGAATGATGAGCTTAGCTATTAGAGAGTGCAAGGAAATCTTTGAGGGGCTGTCTTCATTAGTTGATGTGGGAGGCGGCACTGGGACAATGGCTAGGGGCATTTGTGAAGCGTTTCCTCACTTGAAATGCACAGTGTTAGACCTTCCACAAGTGGTTGCTAACTTACCAAAGAGTGAGAATTTGGACTATGTTGGAGGCGATATGTTTCAGTCCATCCCTTCTGCAGATGCCATTTTTATTAAGAGTGTTCTGCATAATTGGGGCGACGAGGACTGTGTGAAGATTCTGAAAAGATGCAGAGAAGCGATTCCGAGCAGTGCTGAGGGAGGAAAAGTGATAATCATAGATTTGGTTCTGAGTAACAAGAAAGATGAACATGAGTTGGCCAAGACAAAGCTCTTCAATGACATGATGATGATGGTTTTGGTGGCTGGGAAAGAGAGGTGCGAGGAAGAATGGGAAAAGCTCTTCTTGGAAGCTGGTTTCAGCCACTACAAAATAACACCTAGATTTGGTGTACTGTCGCTTATTGAGGTCTATCCTTAG 1065 0.4563 MDHINGQGRSELFEAQSFIYKHVFSFMDSMSLKCAVQLGIPDAIHNHNQPITLPELASAIQVPPEKTSRLHQLMRLLVHSGFFAMQKVDENQEGYVLTPPSRLLVKGNATSLAPIVLGMLDPVLVTPWHFLGSWLQGSSLTAFEAAHGMDLWNYGNQNPEFFSLIGEIMATDSRMMSLAIRECKEIFEGLSSLVDVGGGTGTMARGICEAFPHLKCTVLDLPQVVANLPKSENLDYVGGDMFQSIPSADAIFIKSVLHNWGDEDCVKILKRCREAIPSSAEGGKVIIIDLVLSNKKDEHELAKTKLFNDMMMMVLVAGKERCEEEWEKLFLEAGFSHYKITPRFGVLSLIEVYP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0194 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
Vvi10g0194 354 SUPERFAMILY "Winged helix" DNA-binding domain 10 108 IPR036390 -
Vvi10g0194 354 CDD AdoMet_MTases 193 292 - -
Vvi10g0194 354 FunFam O-methyltransferase ZRP4 106 354 - -
Vvi10g0194 354 Gene3D - 2 104 IPR036388 -
Vvi10g0194 354 FunFam Coniferyl alcohol 9-O-methyltransferase 2 104 - -
Vvi10g0194 354 Pfam O-methyltransferase domain 128 336 IPR001077 GO:0008171
Vvi10g0194 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Vvi10g0194 354 PANTHER O-METHYLTRANSFERASE 19 339 IPR016461 GO:0008168
Vvi10g0194 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 353 IPR029063 -
Vvi10g0194 354 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Vvi10g0194 354 Gene3D Vaccinia Virus protein VP39 105 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0194 Vvi-Chr10 1737829 1739093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0194 14 352 Monolignol Biosynthesis Gene Families AT5G54160 33.718 8.60e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0194 K22588 - vvi:100243529 717.227