Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0191 ATGGCACTTAGATGTGCAGTTCAGCTAGGCATTCCTGACATAATCCACAACCATGCCCACCCCACGACTCTTCCCCAGTTGGTCTCCGCGCTTCATATCCCCCCCACAAAAGCCAGTTGTGTGCACCGGCTCATGCGTTTGCTGGTGCATTCTGGCTTCTTTGCTATGGCAAAAGTTCATGAACATGAGGAAGAAGAAGGCTATATTCTCACACCTTCTTCTAGGCTCCTCCTCAAAGACAACCCAACTTCCAACTTATCACCCCTCGTTTTGACCATGCTTCATCCAGTATTGGTAACTCCTTGGCATTTCTTTGGAGACTGGTTGAGAGGGGATGACTTGACAGCCTTTGAGACCGCACATGGGGTGAGCTTTTGGGACCATGGGAGCCATAACCCTGAAATTTTCAATCTTTTCAATGAAGGAATGGCCAGTGACTCTCAAATGATGAGTGTGGTTAATTTTAGAGAGTTGAAGCCAGTTTTTGAGGGGTTGAGTTCATTGGTAGATCTGGGAGGTGGGACAGGTCTTCTTGCCAGGATCATTTCGGAGGCCTTCCCTCAATTGAAATGCACAGTGTTTGACCTTCCCCACGTTGTTGCTAACTTACCAGAGAGTAGGAACTTGGAGTATGTTGGAGGTGATATGTTTCAGTCCGTCCCTTCTGCCGATGCCATTCTACTTAAGTGTGTCCTGCATGATTGGAGTGATGAAGATTGCCTGAAGATACTGAAGAAATGCAGAGAAGCAATTCGAAGCGAAGAAGAGGGAGGAAAGGTTATCATCATAGACGTAGTGATAAATGAAAAGAAAGATGAAGATGACATAACAGAAACAAAGCTGCTGATGGACATGATGATGATGACACTGGTAAATGGAAGAGAAAGAAATGAGAAAGAGTGGGAAAAGCTCTTCTTGGAGGCTGGTTTCAGGCACCATAAGATAAGCCCCATATTTGGTCTAAGGTCCCTTATTGAGGTGTTTCCTTAG 990 0.4566 MALRCAVQLGIPDIIHNHAHPTTLPQLVSALHIPPTKASCVHRLMRLLVHSGFFAMAKVHEHEEEEGYILTPSSRLLLKDNPTSNLSPLVLTMLHPVLVTPWHFFGDWLRGDDLTAFETAHGVSFWDHGSHNPEIFNLFNEGMASDSQMMSVVNFRELKPVFEGLSSLVDLGGGTGLLARIISEAFPQLKCTVFDLPHVVANLPESRNLEYVGGDMFQSVPSADAILLKCVLHDWSDEDCLKILKKCREAIRSEEEGGKVIIIDVVINEKKDEDDITETKLLMDMMMMTLVNGRERNEKEWEKLFLEAGFRHHKISPIFGLRSLIEVFP* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0191 329 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 85 327 IPR029063 -
Vvi10g0191 329 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 329 IPR016461 GO:0008168
Vvi10g0191 329 PIRSF O-mtase 1 329 IPR016461 GO:0008168
Vvi10g0191 329 Pfam O-methyltransferase domain 102 311 IPR001077 GO:0008171
Vvi10g0191 329 PANTHER O-METHYLTRANSFERASE 1 310 IPR016461 GO:0008168
Vvi10g0191 329 FunFam O-methyltransferase ZRP4 80 329 - -
Vvi10g0191 329 Gene3D - 1 77 IPR036388 -
Vvi10g0191 329 FunFam Coniferyl alcohol 9-O-methyltransferase 1 77 - -
Vvi10g0191 329 CDD AdoMet_MTases 168 267 - -
Vvi10g0191 329 Gene3D Vaccinia Virus protein VP39 80 329 IPR029063 -
Vvi10g0191 329 Pfam Dimerisation domain 1 49 IPR012967 GO:0046983
Vvi10g0191 329 SUPERFAMILY "Winged helix" DNA-binding domain 1 82 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0191 Vvi-Chr10 1721881 1723042 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0191 1 328 Monolignol Biosynthesis Gene Families AT5G54160 34.234 3.49e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0191 K22588 - vvi:100260643 668.692