Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0190 ATGTTAGAGAGTCGAGACCAGTTTTTTGAGGGGTTGAGCTCATTGGTAGATGTAGGGGGTGGGACAGGACTTACTGCCAGGACCATTTCCGAGGCCTTCCCTCGGTTGAAATGCAGAGTGTTTGACCTTCCCCATGTTGTTGCTAACTTACCAGAGTATAGGAACTTGGAGTTTGTTGGAGGTGATATGTTTCAGTCTGGCCCTACTGCGGATGCCACTCTAATGAAGACTGTCTTGCATGATTGGAGTGATGAAGATTGCGTGAAGATACCAAGAAATGCAGAGAAGCAATTCCAAGGGAAGAAGAGGGAGGAAAAGGTTGTTATCATAGAGATGGTGACAAATGAAAAGCTGCTCATGGACATCATGATGTTGATGACAGTGTTGAATGGAAGAGAAAGAAATGAGAAAAACTGGTCTGGCACCCCAACCCCATTGGAGAACAAGTCAAAGGTTGATAAGAGGGACGTGGGTATCGCGTTGAATGTGATCGCCTCCAACACATCTGCAGCGACTTTCTTAGCTTCAGTCTCCTTGACTCTCAGCTCTATAATTGGAGCCTGGATCGGGAGCTCATCAAACAACGTCTTCCAGAGCGAACTGATATATGGGGACACAAGGCCTTCCACCATTTCCATCAAGTACATAAGCCTCCTCACATGCTTCATCCTTGCTTTTTCTTGCTTTGTTCAATCAGCTAGGTGCTTTGTCCACGCAAACTACCTAATAAGCACACCAGATAGCGACATACCTGTGAAAAATGTGGAGATGGTTGTTATTAGGGCAGGCGAATTTTGGTCGCTTGGCCTTAGAGCAATTTATTTCGCTATCGATTTGCTGCTGTGGTTTTTTGGCCCAATCCCAATGTTTGTCTGCTCTGTGGTCTTGGTGATTCTCCTATATCACCTGGATTGCAATTCCAATCCACTCCATCGACATCGGTCGCTGGCAAGCCGGTCAGTCAAGAGGGTAGGTGAGCAAGTGACCGCTGCAGCCATGACCATTGAAGACCATGTTGCAGATTATGTAACCATGGTTGTTGATTTTGCTACCGGAAGTGGAGAGACACCATTCCCTGCGCTTGCTATTGCTTACTGCCTAAGAAAAAACACCACCCGTAATGACCCACAGAAATGA 1137 0.4644 MLESRDQFFEGLSSLVDVGGGTGLTARTISEAFPRLKCRVFDLPHVVANLPEYRNLEFVGGDMFQSGPTADATLMKTVLHDWSDEDCVKIPRNAEKQFQGKKREEKVVIIEMVTNEKLLMDIMMLMTVLNGRERNEKNWSGTPTPLENKSKVDKRDVGIALNVIASNTSAATFLASVSLTLSSIIGAWIGSSSNNVFQSELIYGDTRPSTISIKYISLLTCFILAFSCFVQSARCFVHANYLISTPDSDIPVKNVEMVVIRAGEFWSLGLRAIYFAIDLLLWFFGPIPMFVCSVVLVILLYHLDCNSNPLHRHRSLASRSVKRVGEQVTAAAMTIEDHVADYVTMVVDFATGSGETPFPALAIAYCLRKNTTRNDPQK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0190 378 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 168 IPR016461 GO:0008168
Vvi10g0190 378 Pfam O-methyltransferase domain 3 140 IPR001077 GO:0008171
Vvi10g0190 378 Gene3D Vaccinia Virus protein VP39 1 142 IPR029063 -
Vvi10g0190 378 Pfam Protein of unknown function, DUF599 159 308 IPR006747 -
Vvi10g0190 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 139 IPR029063 -
Vvi10g0190 378 PANTHER OS02G0292800 PROTEIN 74 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0190 Vvi-Chr10 1705258 1719222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0190 9 139 Monolignol Biosynthesis Gene Families AT5G54160 42.553 2.51e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0190 - - vvi:100250378 511.916