Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0188 ATGGCTGGCGACGAGGAGACGACGACGACGACGACGGCAGCAACACTTGAAACAACGTCCACTTGGGCTGTTGCCTCTGTTTGCTTCATTTTGATTGCACTCTCCATACTTATTGAGCATGCTCTCCATCTCTTAGCCAAGTACTTCAACAAGAAGCGGAGGAGGTCTCTCATTCATGCTCTTAACAACGTCAAATCGGAGTTGATGCTCTTGGGGTTCGTATCTTTGTTGCTGACTGTGTGCCAAAAGTATATTGCGAAGATTTGTATCCCAAGGAGCGTAGGTGAAACTTTTCTTCCCTGCAAGACCTTGACAGAAAGTGATTCAGAAGAAGAAACCAAATGCGAAGAGCAGGGAAAGATGTCTTTGTTGTCTACACAAGGCGTGGAGGAACTACAGTACTTAATTTTCGTGCTGGCCTTCTTCCATTCGCTCTACTGCGTCCTCACATTCGGTCTTGGGATGGCCAAGATGAAGAAATGGGAGTCCTGGGAGGCAGAAACAAGAACACTGGAATATCAGTTTACAAATGATCCACGGAGGTTCAGGCTCATCCATCAGACATCATTTGGAAAGCAACATCTGAGATATTGGAGTGAGCATCGGATACTTCGTTGGCCGGTTTGTTTTATTCAGCAGTTCTATCCATCCGTCTCCAAAGTGGATTACTTGACTCTTAGACATGGGTTCATTATGGCCCATTTTGCAGAAGGAAGCAACTATGACTTCCAAAAGTATATAAAAAGAGCTTTGGAAAAAGACTTTGGAGTGGTGGTGGGAGGAAGTTTCTGGGTTTGGAGTTTCTCCATGCTTTTTGTGTTCTTCAATGCTCAAGTATTTTACAACTATTTATGGCTACCCTTTATTCCATTGGTGATGCTGTTGTTGGTTGGAACAAAGCTACAGGGCATTATAACTAAGATGTGCCTAGATAGCCATGATAAAGCTCTCGTTGTTAGAGGAACTTTGCTTGTCAGGCCCAGTGATCACTTCTTCTGGTTTGGAAAACCGGAATTGCTCCTACATCTTATGCACTTTATATTGTTTCAGAACTCTTTTCAACTGGCGTTCTTTACATGGACTTGGTACAAATTTGGATTCAGATCATGCTTCCATGATACAACTGAGGATATCGTCATAAGGCTTGTCATGGGTGTGTTAGTACAACTCCTTTGTGGCTACGTGACACTGCCTCTGTATGCCCTGGTCACGCAGATGGGGACATCAATGAGGACAATTGTCTTTACTGAGGGAGTCGTTGAAGGTCTGAACAGATGGAGAAGGAAAGCCAAGAAAAACATAGCACGCAGGAACAACCACTCAGCTCGTCCCTCCCTGGATGCTTCACTGGACAATTCACCTTCTTTTAACACTCTGGATACTTCTTTCTCTGTAGACCTCGATCAGCCATCATCAGATGCTGGCTATTTGACTGTTGAAATATCAGATGAAGAGACGGTCGCAACTAAACAGCCAGAACCGCGTCAGAAGTTGGGATGTTTTGAGGGTTTCGACTTGCGCAAAACATCATAA 1533 0.4436 MAGDEETTTTTTAATLETTSTWAVASVCFILIALSILIEHALHLLAKYFNKKRRRSLIHALNNVKSELMLLGFVSLLLTVCQKYIAKICIPRSVGETFLPCKTLTESDSEEETKCEEQGKMSLLSTQGVEELQYLIFVLAFFHSLYCVLTFGLGMAKMKKWESWEAETRTLEYQFTNDPRRFRLIHQTSFGKQHLRYWSEHRILRWPVCFIQQFYPSVSKVDYLTLRHGFIMAHFAEGSNYDFQKYIKRALEKDFGVVVGGSFWVWSFSMLFVFFNAQVFYNYLWLPFIPLVMLLLVGTKLQGIITKMCLDSHDKALVVRGTLLVRPSDHFFWFGKPELLLHLMHFILFQNSFQLAFFTWTWYKFGFRSCFHDTTEDIVIRLVMGVLVQLLCGYVTLPLYALVTQMGTSMRTIVFTEGVVEGLNRWRRKAKKNIARRNNHSARPSLDASLDNSPSFNTLDTSFSVDLDQPSSDAGYLTVEISDEETVATKQPEPRQKLGCFEGFDLRKTS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0188 510 PANTHER MLO-LIKE PROTEIN 1 14 468 IPR004326 GO:0006952|GO:0016020
Vvi10g0188 510 Pfam Mlo family 15 111 IPR004326 GO:0006952|GO:0016020
Vvi10g0188 510 Pfam Mlo family 111 454 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0188 Vvi-Chr10 1689301 1693052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0188 15 445 MLO family AT2G39200 50.000 2.38e-167 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0188 K08472 - vvi:100267554 1003.82