Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0177 ATGGAGTCGAGGGTGTTGTCCGGCGCCACCACCATTTCCGGCCTCGTCCGGCTCCGTAAACCGGTGAGGGACACCGTTTGCTTCGCTCCTGCCAGACCAATCGGGGCTGTGGGAGACGGCGGGAACCTCATATGGGGGAGGCAGCTCCGGCCAGCTTTGATCCTGGAGAGCGCTCCAGTCGTCGGCATGACCACCGGAAAGCGTGAGATTCTCCGGCCGACTATGGCCTCCACGTCGTCGCCCGCCGAAGGGAGCGATTCCGCCGGGGACGCTAAGATTGGGTTCTTGGACAAGTACCCGGCTCTAGTTACGGGGTTTTTCTTCTTCATGTGGTATTTCCTCAACGTTATATTCAACATCCTCAACAAGAAGATCTACAACTACTTCCCATATCCTTATTTTGTATCGGTAATTCATTTGTTTGTTGGGGTGGTCTACTGTTTGGTGAGCTGGGGCGTCGGCCTTCCCAAGCGAGCTCCTATAGACTCAAACCTCCTGAAACTGCTCATCCCCGTTGCTGTATGTCATGCTCTAGGCCATGTGACTAGCAATGTCTCCTTTGCAGCAGTTGCCGTCTCTTTCACCCACACAATCAAAGCTCTTGAACCCTTCTTCAATGCTGCGGCTTCTCAATTTATACTAGGACAGTCGATACCCTTAACCCTATGGCTATCTCTGGCCCCTGTTGTTCTTGGTGTGTCAATGGCATCATTGACTGAGCTATCATTCAACTGGATTGGCTTCATTAGTGCTATGATTTCTAATATCTCCTTCACTTACAGGAGTATCTATTCAAAGAAGGCCATGACTGACATGGACAGTACTAATATCTATGCTTATATTTCCATCATTGCTCTCATTGTCTGCATTCCACCGGCTCTCATTGTGGAGGGACCTCAACTGATGAAGCATGGCTTTAATGATGCAATTGCTAAAGTGGGTCTGACCAAGTTCCTCTCAGATCTCTTTTGGGTGGGAATGTTTTATCACCTCTACAATCAGCTAGCTACCAACACCCTGGAGAGAGTGGCACCTCTCACACATGCAGTTGGCAACGTCTTGAAACGTGTTTTTGTGATTGGTTTCTCGATCTTGGTCTTTGGTAACAAGATTTCAACACAAACTGGTATTGGAACATGCGTTGCAATTGCTGGAGTGGCAATGTACTCTTTCATAAAGGCCAAGATGGAAGAGGAGAAACGACAACTGAAATCAGCATGA 1221 0.4889 MESRVLSGATTISGLVRLRKPVRDTVCFAPARPIGAVGDGGNLIWGRQLRPALILESAPVVGMTTGKREILRPTMASTSSPAEGSDSAGDAKIGFLDKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWGVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVLGVSMASLTELSFNWIGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALIVEGPQLMKHGFNDAIAKVGLTKFLSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILVFGNKISTQTGIGTCVAIAGVAMYSFIKAKMEEEKRQLKSA* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0177 406 Pfam Triose-phosphate Transporter family 103 390 IPR004853 -
Vvi10g0177 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 319 391 - -
Vvi10g0177 406 PANTHER SOLUTE CARRIER FAMILY 35 105 397 - -
Vvi10g0177 406 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 102 400 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0177 Vvi-Chr10 1589005 1593013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0177 1 401 Antiporters AT5G46110 80.244 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0177 K15283 - vvi:100257292 803.512