Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0107 ATGGCTGAGGCTGCACCTGTTGTTCCAAGTGATGAGTTGTTGGAATGGCCAAAGAAAGATAAGCGCCGATTTCTTCATGTTGTGTATCGAGTTGGTGATCTTGATCGCACCATCAAGTTTTATACGGAGTGTTTCGGGATGAAGCTTTTGCGCAAAAGGGACATTCCAGAAGAGAAATACTCCAATGCCTTTCTCGGGTTTGGCCCTGAAGAGACTAATTTTGTGGTGGAGTTAACATACAAGGAGGATGATGAGACTGTTTTAGAGTATTTACTTAACTGTTTCCAGCAGCAGGCCCCGCGTTATCAACTGAAGTTGCTTCGTAAGGTGTTTGATCCTTGGAAATTGGCTGCACCTGTTGTTCCAAGTGATGAGTTGTTGGAATGGCCAAAGAAAGATAAGCGCCGGTTTCTTCATGTTGTGTATCGAGTTGGTGATCTTGATCGCACCATCAAGTTTTATACGGAGTGTTTCGGGATGAAGCTTTTGCGCAAAAGGGACATTCCAGAAGAGAAATACACCAATGCCTTTCTCGGGTTTGGCCCTGAAGAGACTAATTTTGTGGTGGAGTTAACATACAACTATGGAGTGGACAAGTATGATATTGGAACAGGTTTTGGGCATTTTGCAATTGCAACTCAAGATGTTTATAAGATGGTTGAGGACATTCGGGCCAAGGGTGGGATTATCACAAGGGAACCTGGTCCAGTTAAAGGTGGAAAGAGTGTCATTGCCTTCGCGAAGGATCCTGATGGCTATATTTTTGAGCTCATCCAAAGAGGCCCAACGCCTGAACCACTCTGTCAAGTAATGCTTCGTGTAGGTGATCTGGAAAGGTCTATCAAGTTCTATGAAAAGGCCTTGGGGATGAAGATGGTAAAGAAGACTGACAGACCTGAATACAAGTACTCCATAGCCATGATGGGATATGCAGAGGAACATGAAACAACTGTTCTGGAGTTGACATACAATTATGGTGTCACTGAGTATACCAAAGGAAACGCATATGCACAGGTTGCTATCAGTACTGATGATGTATACAAGAGTGCTGAGGTTGTCAACTTGGTTACCAAAGAGCTGGGAGGAAAGATAACTAGGCAACCAGGACCAATTCCTGGACTCAACACCAAGATCACCTCTTTTCTGGATCCAGATGGCTGGAAGACAGTTCTGGTTGATAATGAAGATTTTCTCAAAGAACTGCACAAGGAAGAGTAA 1218 0.4384 MAEAAPVVPSDELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYSNAFLGFGPEETNFVVELTYKEDDETVLEYLLNCFQQQAPRYQLKLLRKVFDPWKLAAPVVPSDELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYTNAFLGFGPEETNFVVELTYNYGVDKYDIGTGFGHFAIATQDVYKMVEDIRAKGGIITREPGPVKGGKSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYEKALGMKMVKKTDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTKELGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNEDFLKELHKEE* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0107 405 Gene3D - 2 100 IPR029068 -
Vvi10g0107 405 Gene3D - 116 261 IPR029068 -
Vvi10g0107 405 CDD GlxI_Ni 138 258 - -
Vvi10g0107 405 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 135 262 IPR029068 -
Vvi10g0107 405 ProSitePatterns Glyoxalase I signature 1. 269 290 IPR018146 GO:0004462|GO:0046872
Vvi10g0107 405 ProSitePatterns Glyoxalase I signature 1. 139 160 IPR018146 GO:0004462|GO:0046872
Vvi10g0107 405 NCBIfam lactoylglutathione lyase 137 261 IPR004361 GO:0004462|GO:0046872
Vvi10g0107 405 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 269 388 IPR004360 -
Vvi10g0107 405 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 69 IPR004360 -
Vvi10g0107 405 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 137 257 IPR004360 -
Vvi10g0107 405 FunFam Lactoylglutathione lyase 133 262 - -
Vvi10g0107 405 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 267 393 IPR029068 -
Vvi10g0107 405 ProSitePatterns Glyoxalase I signature 1. 26 47 IPR018146 GO:0004462|GO:0046872
Vvi10g0107 405 ProSitePatterns Glyoxalase I signature 2. 203 215 IPR018146 GO:0004462|GO:0046872
Vvi10g0107 405 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 136 260 IPR037523 -
Vvi10g0107 405 PANTHER LACTOYLGLUTATHIONE LYASE 120 402 - -
Vvi10g0107 405 Gene3D - 263 402 IPR029068 -
Vvi10g0107 405 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 23 144 IPR037523 -
Vvi10g0107 405 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 22 97 IPR029068 -
Vvi10g0107 405 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 266 394 IPR037523 -
Vvi10g0107 405 FunFam Lactoylglutathione lyase 263 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0107 Vvi-Chr10 899768 919724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0107 269 393 Calmodulin-binding Proteins AT1G08110 29.333 4.94e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0107 K01759 - vvi:104880463 591.652