Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0067 ATGGACAAAGGATGGGGTCTCACCCTTGATTCTATTGCCATCAATTCGTTTCTCAACAAGCGCAGCCGTGGGATTCTGGAGTCTGGCCCCATGTTGGACATGCCGGTGGGTGATGAGAGGCGGGAGGTGGATTTCTTCGCCGAGAAGACTAGGAGCGTCAGTGTGAAGAAGGAGAATTCTCATGTGGATGAAGCTGCGATCACTGATTTGGATGTCAATACTGGGTTGAATCTTCTGACTGCTAACGCGGGAAGTGATCAGTCGACGGTGGAGGATGAGAATCCGGATAGGGAGAATAAGAGAGCCAAGATTGAGGTGGCGCAATTGCAAGTGGAGCTTGAACGTATGAATGCCGAGAACCAAAAGCTGCGAGGGATGCTGAACCAGGTGACCAACAACTACAGCACTCTTCAGATGCATCTCGTCACACTTATGCAGCAGCAGAGCCAGCAGAACCGTGGAGCCGAAAGCCTCCAAGAACATGGGTCTGTCGGAGGAAAATCTGATGAGAAGAAACATGAGGTTGCGGGAGCGGTGGTGCCCAGGCAGTTCATCGATCTAGGCCCAACTGCCACAGCTGACACGGATGAGCCATCTCAATCTTCATCAGAAGAAAGAACCCGGGATCTCTCTGGATCACCCCAGAATCATCAGGAAAACGGAAAAGGAGCTGGCAGGGAAGAAAGCCCAGAATCTGAAACACAAGGTTGGGTCCAGAACAAGGCTTCCAAATTGAGTCCTCCCAAGACTATTGATCAGTCCGCAGAGGCCACAATGAGGAAAGCCCGCGTCTCGGTTCGTGCCCGATCAGAGGCTCCCATGATCACTGATGGATGCCAATGGCGCAAGTATGGGCAGAAAATGGCGAAGGGGAACCCATGCCCGCGAGCCTACTACCGATGTACCATGGCAGTTGGCTGCCCAGTTCGCAAACAAGTTCAGAGGTGTGCCGAGGACAGGTCAATATTGATAACTACCTATGAAGGAACCCACAACCACCCACTCCCTCCGGCTGCAATGGCCATGGCATCAACGACATCAGCAGCTGCAAACATGCTACTTTCAGGATCCATGTCGAGCGCAGATGGACTAATGAACCCGAATTTCCTGGCCAGGACGATACTCCCTTGCTCATCTAACATGGCGACTATTTCAGCTTCAGCGCCATTCCCCACAGTGACATTGGACCTCACCCACACTCCTTCCCCATTACAGTACCAAAGGCCAACTTCCCAGTTCCCGGTCCCCTTCGCCGCCCCGGCTCAGAGCTTCCCCTCCGCGCAAACCTCTTCTCTGCCTCAAGTTTTCAGTCAGGCCCTCTACAACCAATCCAAATTCTCAGGGCTGCAGCTCTCTCAGGACATGGAATCAGCCCACCAAGCTCCACCAACATTGCATCAGCCACAGCCAGCCTCATTGGCTGACACAGTGAGCGCTGCCACAGCTGCCATCACCGCCGACCCAAACTTCACCGCAGCTCTCGCAGCTGCCATAACCTCGATCATCGGCGGTGGCGCCGCCCACCCAAACACCACCATTAACAGCACCTCCAATGCAACCAACTCCAGCAACACCAACAAAATCAGCAGCTTCCCGACGGGGAATTAA 1608 0.5373 MDKGWGLTLDSIAINSFLNKRSRGILESGPMLDMPVGDERREVDFFAEKTRSVSVKKENSHVDEAAITDLDVNTGLNLLTANAGSDQSTVEDENPDRENKRAKIEVAQLQVELERMNAENQKLRGMLNQVTNNYSTLQMHLVTLMQQQSQQNRGAESLQEHGSVGGKSDEKKHEVAGAVVPRQFIDLGPTATADTDEPSQSSSEERTRDLSGSPQNHQENGKGAGREESPESETQGWVQNKASKLSPPKTIDQSAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRSILITTYEGTHNHPLPPAAMAMASTTSAAANMLLSGSMSSADGLMNPNFLARTILPCSSNMATISASAPFPTVTLDLTHTPSPLQYQRPTSQFPVPFAAPAQSFPSAQTSSLPQVFSQALYNQSKFSGLQLSQDMESAHQAPPTLHQPQPASLADTVSAATAAITADPNFTAALAAAITSIIGGGAAHPNTTINSTSNATNSSNTNKISSFPTGN* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0067 535 MobiDBLite consensus disorder prediction 146 256 - -
Vvi10g0067 535 MobiDBLite consensus disorder prediction 513 535 - -
Vvi10g0067 535 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 74 517 IPR044810 GO:0003700
Vvi10g0067 535 Gene3D WRKY domain 260 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi10g0067 535 SMART WRKY_cls 275 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi10g0067 535 FunFam probable WRKY transcription factor 31 260 337 - -
Vvi10g0067 535 Coils Coil 99 133 - -
Vvi10g0067 535 ProSiteProfiles WRKY domain profile. 270 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi10g0067 535 Pfam WRKY DNA -binding domain 277 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi10g0067 535 MobiDBLite consensus disorder prediction 232 253 - -
Vvi10g0067 535 MobiDBLite consensus disorder prediction 205 220 - -
Vvi10g0067 535 SUPERFAMILY WRKY DNA-binding domain 268 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi10g0067 535 MobiDBLite consensus disorder prediction 163 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0067 Vvi-Chr10 618767 620863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0067 1 508 WRKY Transcription Factor Family AT1G62300 52.522 6.00e-159 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vvi10g0067 WRKY 4.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0067 - - vvi:100255611 992.645