Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0040 ATGGAGTTGACTGACCTCCTTCTCCTCTCTTTGGCTCTCATCTTCCTCCGTTTCTGGTGGCGGTACTGGTCAGTCACCGGCGGTGGTCCCAAGAACCTCCCGCCAGGCCCACCCGGGTGGCCGCTGGTTGGGAACCTGGTGCAGGTGATCCTCCAGCGCCGTCCCTTCATCTACGTGGTACGTGATTTACGTGCCAAGTATGGACCTATCTTCACGCTACAGATGGGTCAGCGGACTCTGGTTATTGTGACGAGCTCTGAGCTGATTCATGAAGCTTTGGTGCAGAGGGGGCCGATATTCGCTAGCAGACCAGAGGATTCGCCAACACGGCTTGTGTTCAGTGTGGGGAAATGCGCCATTAACTCGGCTCAGTATGGGCCGCTTTGGAGGACTTTGCGGCGGAACTTTGTGGCGGAGCTGATAACTCCCACGAGGATCAGGCAGTGCAGTTGGATACGGAAGTGGGCGCTGGAGAACCACATGAGGAGGCTGCAAATGGAGGTTTCGGAGAAGGGTTTTGTGGAGGTGATGAGCAACTGTAGGCTCACTATCTGTAGCATTCTTATATGTATATGTTTTGGTGCAAAGATCTCCGAGCGGCGGATTAAGGAGATCGAGAGCGTACTGAAGGACGTCATGTTGATGACTACGCCGAAGCTCCCGGACTTCCTGCCTGTTCTGACGCCTCTGCTGCGCCGGCAACTGAGAGAAGCGAAGGAGCTGAGGAAGAAACAAATGGAGTGCATGGTTCCACTCGTGAGAAGCAGAAGAGCATTCGTGGAGAGTAAGGGAGCCCCCGGCCGCAGCAGCTCAGAAATGGTGAGTCCGATCGGTGCAGCCTATATCGACTCGCTTTTTGGGCTGGAGCCCGCCGAGCGAGGTCGGTTGGGAGAGGAAGAGCTCGTTACACTGTGCTCGGAAATCATCAACGCCGGAACCGATACCAGTGCAACCACGGTTGAGTGGGCTCTGCTTCACTTGGTGATGAACCAGGACATTCAGCAAAAGCTTTACAAAGAGATAATCGACTGTGTAGGAAAAAATGGAGTTGTCACGGAAGGAGACGTAGAGAAAATGCCCTACCTCGGTGCAATCGTGAAGGAAACTTTCCGGCGCCACCCGCCCAGTCATTTCGTTCTATCCCATGCAGCCACCAAGGACACAGAGCTCGGCGGCTACACAATTCCAGCTGACGTGAACGTGGAGTTCTACACCGCCTGGGTGACAGAGGACCCGGACCTGTGGCAGGACCCGGCAGAGTTCCGGCCTGAGAGGTTCCTCCAAGGAGACGGAGTCAACGTGGACGTGACCGGAACCCGGGGAGTGAAAATGGTCCCATTTGGCGCGGGCAGGAGAATCTGTCCAGCCATGAATTTGGGCACGTTGCATGTGAATTTGTTGATTGCAAGGATGATCCATGCATTCAAATGGATCCCGGCCCCGGGTTCCCCACCTGACCCGACTGAAACCTTTGCCTTCACAGTTGTCATGAAAAACCCCCTTAAAGCTATCATCTTACCTAGATGA 1527 0.5481 MELTDLLLLSLALIFLRFWWRYWSVTGGGPKNLPPGPPGWPLVGNLVQVILQRRPFIYVVRDLRAKYGPIFTLQMGQRTLVIVTSSELIHEALVQRGPIFASRPEDSPTRLVFSVGKCAINSAQYGPLWRTLRRNFVAELITPTRIRQCSWIRKWALENHMRRLQMEVSEKGFVEVMSNCRLTICSILICICFGAKISERRIKEIESVLKDVMLMTTPKLPDFLPVLTPLLRRQLREAKELRKKQMECMVPLVRSRRAFVESKGAPGRSSSEMVSPIGAAYIDSLFGLEPAERGRLGEEELVTLCSEIINAGTDTSATTVEWALLHLVMNQDIQQKLYKEIIDCVGKNGVVTEGDVEKMPYLGAIVKETFRRHPPSHFVLSHAATKDTELGGYTIPADVNVEFYTAWVTEDPDLWQDPAEFRPERFLQGDGVNVDVTGTRGVKMVPFGAGRRICPAMNLGTLHVNLLIARMIHAFKWIPAPGSPPDPTETFAFTVVMKNPLKAIILPR* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0040 508 CDD CYP77_89 66 502 - -
Vvi10g0040 508 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 FunFam Cytochrome P450 family protein 28 508 - -
Vvi10g0040 508 Pfam Cytochrome P450 34 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 500 - -
Vvi10g0040 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Vvi10g0040 508 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi10g0040 508 SUPERFAMILY Cytochrome P450 34 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0040 Vvi-Chr10 364438 365964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0040 1 508 Cytochrome P450 AT1G11600 70.898 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0040 K21995 - vvi:100246851 989.564