Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0036 ATGATTTCTTCAATTAAACAATCAACTGGGTCTTTCACTCGTTGCGATTTCTTGCCCAGAAGGCAGCGGTGTGTGGCGAAATCGGATGTTGTTTCAGTGCCCAGTTCTGCAAATGTGCAGGGGTTTAAGTGTTCTGCAAAACCCTTGTACATTTGTTCGGTTGAAGGGTTTGGGTCCAGATCAATTGGTTCCAAGTCCAGTAGCGTTTGCAGGGCTTATGAGGCGGAACGATCGCAGCCTTTGGACCTCAACATTGAACTTTCGGACCAGGAGGCGCGATCGGAGGCTGCCCAGAAGCTTAAGATTGGTATTTATTTTGCGACTTGGTGGGCTCTGAATGTGGTGTTCAATATATACAACAAGAAGGTTTTGAACGCTTTTCCTTATCCTTGGCTCACCTCAACTCTGTCGCTCGCAACTGGGTCGCTGATGATGTTGATCTCCTGGGCTGTGAGGATCGCTGAACCGCCCAAGACCGATTTGGACTTCTGGAAAACCCTCTTTCCTGTTGCAGTAGCTCATACAATTGGTCATGTAGCAGCAACTGTTAGCATGTCAAAAGTTGCAGTTTCCTTCACCCACATCATCAAGAGTGGTGAGCCTGCTTTCAGTGTCTTGGTTTCAAGGTTTCTCTTAGGCGAGACCTTTCCGGTGCCGGTCTACTTCTCACTTCTGCCAATTATTGGAGGCTGCGCACTGGCTGCTGTCACTGAACTCAACTTCAATATGACTGGGTTTATGGGGGCTATGATTTCAAATCTGGCATTTGTGTTCCGGAACATATTCTCAAAGAGAGGGATGAAGGGGAAGTCTGTTGGGGGAATGAACTACTATGCCTGTCTTTCCATGTTGTCTCTCTTGATTCTCACACCTTTCGCCATTGCTGTGGAAGGGCCCCAGATGTGGGCGGCTGGCTGGCAAAAAGCTATCTCTCAGATTGGACCAAATTTCATATGGTGGGTGGCGGCTCAGAGTGTCTTCTATCACTTGTATAATCAGGTATCATACATGTCCCTGGATCAGATCTCTCCCTTGACGTTTAGCATAGGAAACACGATGAAGCGGATTTCTGTCATAGTCTCCTCCATAATCATCTTCCATACACCTGTTCAACCCATCAATGCCCTTGGAGCTGCCATTGCAATCCTTGGAACGTTTCTCTATTCGCAGGCAAAGCAGTGA 1182 0.4755 MISSIKQSTGSFTRCDFLPRRQRCVAKSDVVSVPSSANVQGFKCSAKPLYICSVEGFGSRSIGSKSSSVCRAYEAERSQPLDLNIELSDQEARSEAAQKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLATGSLMMLISWAVRIAEPPKTDLDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYFSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVGGMNYYACLSMLSLLILTPFAIAVEGPQMWAAGWQKAISQIGPNFIWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0036 393 Pfam Triose-phosphate Transporter family 100 389 IPR004853 -
Vvi10g0036 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 292 390 - -
Vvi10g0036 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 236 - -
Vvi10g0036 393 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 100 392 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vvi10g0036 393 PANTHER SOLUTE CARRIER FAMILY 35 101 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0036 Vvi-Chr10 340934 344299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0036 47 393 Antiporters AT1G61800 83.285 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0036 K15283 K05350 vvi:100241727 745.347