Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g0031 ATGGTGTGGAGACTGCTGGTCTACATGTTCTTTATTTCTTTCACTTCTGATCAATTTATTAGAGCCCAGGATTACACAGATTATGTTCCGCCCGCTCCGCCCCCGGAAGAAGAAAACTGTGATGGGATTTTCGTGTCGTACACCTTCATATCCAGGCAGAAGGAGTTCCCCCATGTCAAGAATGCATCGGCGCAGGCCTGGGCCTTTAAGGCCATGGCGACCGTGCTCAATGCAGGCACCTTTGAGCTCAAGGCATGGAAGATATTCATTGGGTTTCAGCACGATGAGATTCTAGTTTCAGCAGGTGGAGCGGTTGTAATGAATGGGGATGATATGCCTGCAGCGGTTGGGAATGGGACTTACCTCTCAGGCTTCCCTCAGACTGATTTGAAAACGTCCATTGAAACTGCTGGGGATCTTACCCAAATAGAGGTCCAAATTCCGATCACCGGGACTCAGTTTGGGGTGAAGCCACCAGGGGTTCCAATGCCTAGAACCATTAGTCTTGCAAATGACGGATACAAGTGCCCGAAACCGACTGTAAAGAAGACCGCAATGCATGTATGCTGCACTAGAAAGCCGAAGTTTAAGGTCAAAACCGAATCGACAAAGTTCTTGCCACGACAATATGGGGATCTGTCCTTTGTCTATGATATTATCCAAGCATATGATGGGAATTATCTGGCTCAAGTAACCATAGAAAACAATCACCCTTTGGGGCGTCTAGATCATTGGAATTTGACTTGGGAGTGGATGAGAGGGGAGTTCATAAACACAATGAGAGGAGCTTACACTCATAAGATAGACTCCACTGACTGCATTTATGGAGCTGCTGGGCAATACTACAAAGGCCTTGATTTTTCCCAAGTCATGAACTGCGAAAAGAACCCCATCATTGGAGACCTGCCTTCTGAAAAGGCCAAAGATGATAAAGTGGGATTTATACCACACTGTTGTAGAAATGGCAGTCTCCTCCCAACCATAATGGATCAAACTAAATCAAAGGCAGCCTTTCAACTGCAGGTGTACAAGATTCCACCAGATATGAATAGAACAGTTCTGTTTCCTCCCCAGAAGTGGAAAATCGTTGGGGTGCTCAATCCAGACTACAAGTGTGGGCCGCCAATAAGAGTGGACCCGACCGAGTTTCCAGACGCGAGCGGGCTGCTGCAGGTCACTAGCAGCGCCATTGCAAGCTGGCAGGTGACCTGCAACATCACCAGGCCTAAGAAGAGGAATTCAAGATGCTGTGTCTCCTACTCGGCCTACTATAATGATTCAGTGATACCTTGTAATACATGTGCTTGTGGTTGTGATGACACAGAAACTTGCAATCCAAACATCCCATCAATGCTTCTCCCTTCTGAAGCTCTTTTGGTTCCTTTTGAAAACAGAACTGCAAAGGCCAAGGCTTGGGCCAAATTAAAGCATCTTAACGTCCCCAGCCCATTGCCTTGCGGTGACAATTGTGGGGTTAGCATAAATTGGCACATAAATTCAGACTACAAGACTGGATGGACAGCCCGGATCACGCTGTTCAATTGGGAAGAAATCATTTTTGAGGATTGGTTTGTTGCAGTCGAAATGAAAAAGGCCTTCCTGGGTTATGAAAATATTTACTCCTTCAATGGAACAGTACTCAAGGATATCAATAATACTCTCTTCTTCCAAGGATTACCGGGTTTAAACTACTTGATGGGCGAGGTGAATGGATCAGATCCGAAAAGTGATCCCAAGGTACCTGGTAAGCAGCAATCCGTGATTTCCTTTAAGAAGAAGCTTACACCTGGTATCAAGATAGTACAAGGAGATGGCTTTCCTTCAAAGCTGTATTTCAATGGGGAAGAGTGTTCACTTCCTACAGAATTTCCCATAGGCGATGGAAACAGATATCGTGTAAATCTTGTGCCTGTAATTCTCCTCACACTTGTGACTTCTATGCTGATGACAAATCATTTGCACTGA 1965 0.456 MVWRLLVYMFFISFTSDQFIRAQDYTDYVPPAPPPEEENCDGIFVSYTFISRQKEFPHVKNASAQAWAFKAMATVLNAGTFELKAWKIFIGFQHDEILVSAGGAVVMNGDDMPAAVGNGTYLSGFPQTDLKTSIETAGDLTQIEVQIPITGTQFGVKPPGVPMPRTISLANDGYKCPKPTVKKTAMHVCCTRKPKFKVKTESTKFLPRQYGDLSFVYDIIQAYDGNYLAQVTIENNHPLGRLDHWNLTWEWMRGEFINTMRGAYTHKIDSTDCIYGAAGQYYKGLDFSQVMNCEKNPIIGDLPSEKAKDDKVGFIPHCCRNGSLLPTIMDQTKSKAAFQLQVYKIPPDMNRTVLFPPQKWKIVGVLNPDYKCGPPIRVDPTEFPDASGLLQVTSSAIASWQVTCNITRPKKRNSRCCVSYSAYYNDSVIPCNTCACGCDDTETCNPNIPSMLLPSEALLVPFENRTAKAKAWAKLKHLNVPSPLPCGDNCGVSINWHINSDYKTGWTARITLFNWEEIIFEDWFVAVEMKKAFLGYENIYSFNGTVLKDINNTLFFQGLPGLNYLMGEVNGSDPKSDPKVPGKQQSVISFKKKLTPGIKIVQGDGFPSKLYFNGEECSLPTEFPIGDGNRYRVNLVPVILLTLVTSMLMTNHLH* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g0031 654 Pfam COBRA-like protein 227 407 IPR006918 GO:0010215|GO:0016020
Vvi10g0031 654 PANTHER COBRA-LIKE PROTEIN 7 5 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi10g0031 Vvi-Chr10 265196 267250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi10g0031 5 651 COBRA Gene Family AT3G20580 60.731 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g0031 - - vvi:100267591 1366.29