Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi10g0007 | ATGATGTCCTCCCAAGGTGTCTCAAAAGCCATTCAATTGCTTTTCATTTCTTCTGTTCTTTCTGGCTTTCCTGATCTTGTCTGTGCTGATCCTCCTTATAATGTTTGTTCAACCACCACTACTTATGGACTTAATAGTCTCTTCCAAAGTAATCTTGAAAATCTCCTTGATTCCTTACCTTCTAAAGCTTTTGTCTCCCACTTTGACAATACCTCCATTGGAAATGGCCTAGACAGAGTTAATGGTGCCTTTCTGTGCCTCAATTATGTTGCAAATGATCAATGCAGAAACTGCATATCTACAGCAGCATACCATGTCAAGAAACTTTGTCCAAACATGAATGAAGCCATCGTGTGGGAGGATGAATGCCAAATTCTCTATTCTAATGAAACATTCTTAGGTCATTTGAGTACTACAGGAAACATACCTCTAGATAATATGAAGAATGTTTCAGACTTAGAGTCAGAACAGCTGAGATTTAGATCTGTTGTGAACGATACCCTGCAGAACCTTATCAAACAGGCAGCTTTCAATTCTTCAACTGACATGTATGCCACCAAACCAGTAGTCTTTACAGATGTAGATATCTTATATGCTCTAGTGCAATGCACTCCAGACTTGTCACCAGATAACTGTAGTATATGCCTTCAGACTGCCACAACAGAAATCTTAGCAGTCTATTATTTTTCACGGGGCGCAAGGCTTCTCAGTCGTAGTTGCTATCTAAGGTATGAGTTCTACCCCTTTTATGAAGTTGCAACTGAGCCCCAAGCTCCTGTTTCTCCACAAAATCCGGGGACAAGGAAAGATGGAAGAAGGAAAACAGGGATGATTCTAATCATTACAAGTGTATCAGTATCTTTGGTTGTGGCAACTTTGGCTTTCTATGTCTATTGTCTAGCAACGAGGAATGGAAAGAAAAAGGAGAGAAAACAATATCTAAATCGAGAAGTTCAATTACCTGATATTGATGACCCCAGTTACACAGGTCCATATCAATTTCACGGAAGGAAAAGTCTGAATTCTCAGGAATTTCTCTTTATTGATTTAGCAACTATACATGAAGCTACTGACAACTTCTCTGAATTGAATAAGCTCGGACAAGGTGGTTTTGGCCCTGTTTACAAGGGTGTTTTGCGTGATGGCAAGGAAGTAGCAGTTAAGAGGCTTTCAAGTGATTCTGAGCAAGGTTCAGAGGAATTCACAAACGAAGTTCTGCTAATAATGAAACTTCAACATAAGAATCTGGTCAGGCTTTTGGGCTTTTGTGTGGACAGGGAGGAAAGGATGCTTGTCTATGAATATATGCCCAACAGTAGCTTAGATGTCTTCCTCTTTGATCCAAGGAGACGTGCACAACTTGATTGGAGCAGACGGCTTAATATTATTGGTGGAATTGCTCGAGGGATTCTTTATCTTCACGAAGATTCTCGACTTAGAATCATTCATAGGGACCTAAAAGCAAGCAATGTGCTATTGGACTGTGATATGAAGCCAAAGATCTCTGACTTTGGAATGGCAAGGATCTTTGGAGGAAGTGAAGGTGAAGCTAACACCGCTACAATAGTTGGAACACATGGATATATGGCTCCAGAGTATGCTATGGAAGGGCTATATTCCGTTAAGTCTGATGTTTTTAGCTTCGGAGTTCTCTTACTTGAGATCATAACTGGGAGGAGGAATTCTGGCTTCCATCTCTCCAAGCGCGCTCCTAGCCTCATATCATATGTGAGTTTATCTGGATTAACTTAA | 1752 | 0.4047 | MMSSQGVSKAIQLLFISSVLSGFPDLVCADPPYNVCSTTTTYGLNSLFQSNLENLLDSLPSKAFVSHFDNTSIGNGLDRVNGAFLCLNYVANDQCRNCISTAAYHVKKLCPNMNEAIVWEDECQILYSNETFLGHLSTTGNIPLDNMKNVSDLESEQLRFRSVVNDTLQNLIKQAAFNSSTDMYATKPVVFTDVDILYALVQCTPDLSPDNCSICLQTATTEILAVYYFSRGARLLSRSCYLRYEFYPFYEVATEPQAPVSPQNPGTRKDGRRKTGMILIITSVSVSLVVATLAFYVYCLATRNGKKKERKQYLNREVQLPDIDDPSYTGPYQFHGRKSLNSQEFLFIDLATIHEATDNFSELNKLGQGGFGPVYKGVLRDGKEVAVKRLSSDSEQGSEEFTNEVLLIMKLQHKNLVRLLGFCVDREERMLVYEYMPNSSLDVFLFDPRRRAQLDWSRRLNIIGGIARGILYLHEDSRLRIIHRDLKASNVLLDCDMKPKISDFGMARIFGGSEGEANTATIVGTHGYMAPEYAMEGLYSVKSDVFSFGVLLLEIITGRRNSGFHLSKRAPSLISYVSLSGLT* | 584 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi10g0007 | 583 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 481 | 493 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi10g0007 | 583 | Pfam | Protein tyrosine and serine/threonine kinase | 363 | 558 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi10g0007 | 583 | Gene3D | Phosphorylase Kinase; domain 1 | 332 | 435 | - | - | |
Vvi10g0007 | 583 | Gene3D | - | 145 | 249 | IPR038408 | - | |
Vvi10g0007 | 583 | Gene3D | - | 31 | 132 | IPR038408 | - | |
Vvi10g0007 | 583 | ProSiteProfiles | Gnk2-homologous domain profile. | 141 | 249 | IPR002902 | - | |
Vvi10g0007 | 583 | SUPERFAMILY | Protein kinase-like (PK-like) | 343 | 561 | IPR011009 | - | |
Vvi10g0007 | 583 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase B120 | 436 | 527 | - | - | |
Vvi10g0007 | 583 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 332 | 435 | - | - | |
Vvi10g0007 | 583 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 32 | 131 | - | - | |
Vvi10g0007 | 583 | ProSiteProfiles | Gnk2-homologous domain profile. | 30 | 132 | IPR002902 | - | |
Vvi10g0007 | 583 | ProSiteProfiles | Protein kinase domain profile. | 360 | 583 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g0007 | 583 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 141 | 249 | - | - | |
Vvi10g0007 | 583 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 40 | 577 | - | - | |
Vvi10g0007 | 583 | Pfam | Salt stress response/antifungal | 36 | 129 | IPR002902 | - | |
Vvi10g0007 | 583 | Pfam | Salt stress response/antifungal | 156 | 246 | IPR002902 | - | |
Vvi10g0007 | 583 | SMART | serkin_6 | 360 | 582 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g0007 | 583 | Gene3D | Transferase(Phosphotransferase) domain 1 | 436 | 579 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi10g0007 | Vvi-Chr10 | 72697 | 75026 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi10g0007 | 27 | 577 | Receptor kinase-like Gene Family | AT4G05200 | 45.246 | 1.18e-155 | 461 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vvi10g0007 | PK_Tyr_Ser-Thr | 1.5e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi10g0007 | - | - | vvi:109121465 | 1142.1 |