Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi10g0006 | ATGGACACCAAGATTTCAGATTTTGGCATTGCAAAGCTTGTTGGGATGGATCAAACTCATTGCAGTACCAGCAGACTAGTAGGAACGCTTGGATATATGGCACAGGAATATGCAATGGCAGGGCATTTCTCTGTTAAGTCAGACGTCTTCAGTTTCGGTATGATACTTCTGGAGATTGTGAGTGGTCAAAAGAACATCTCCTTCCATCATTCAGGATAA | 219 | 0.4247 | MDTKISDFGIAKLVGMDQTHCSTSRLVGTLGYMAQEYAMAGHFSVKSDVFSFGMILLEIVSGQKNISFHHSG* | 73 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi10g0006 | 72 | ProSiteProfiles | Protein kinase domain profile. | 1 | 72 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi10g0006 | 72 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 65 | IPR011009 | - | |
Vvi10g0006 | 72 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 1 | 68 | - | - | |
Vvi10g0006 | 72 | Pfam | Protein tyrosine and serine/threonine kinase | 3 | 64 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi10g0006 | 72 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 71 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi10g0006 | Vvi-Chr10 | 55523 | 55926 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi10g0006 | 1 | 71 | Receptor kinase-like Gene Family | AT4G23230 | 61.972 | 1.22e-27 | 101 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vvi10g0006 | PK_Tyr_Ser-Thr | 4.5e-13 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi10g0006 | - | - | fve:101305918 | 108.997 |