Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1264 ATGGGAATCTTTTTGGAAGAGGCTGAGAAGGTGAAGACTGAAAGGGGATCCCTCAGAGACATCCTCGACAGCTTGCAGCAAGCCAACGAGGAGAGCAAGTCTCTGCATAAGGTTGAGGAGCTCAAGGCACTAAGGAGCAGGATCAACACCAACATTGTTGTAGTCCTAAAGAAGGCCAGGACGATTCAAACCCAACTCGAGGAGATGGACCGGGCCAACGCCGCCAACCAAAGGCTCTCCGGTCTCAAGGACGACACGACGACCATCTACCGAACCCGGATCGCTGTCACCAATAGGCTGAGGAAGAAGTTGAACGAGCTGATGATGGAGTTTCAAGGGTTAAGGCAGATATGA 354 0.5198 MGIFLEEAEKVKTERGSLRDILDSLQQANEESKSLHKVEELKALRSRINTNIVVVLKKARTIQTQLEEMDRANAANQRLSGLKDDTTTIYRTRIAVTNRLRKKLNELMMEFQGLRQI* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1264 117 Pfam Syntaxin 4 116 IPR006011 GO:0016020
Vra9g1264 117 PANTHER SYNTAXIN 2 116 IPR045242 -
Vra9g1264 117 SMART SynN_4 1 117 IPR006011 GO:0016020
Vra9g1264 117 PANTHER SYNTAXIN-RELATED PROTEIN KNOLLE 2 116 - -
Vra9g1264 117 SUPERFAMILY t-snare proteins 3 116 IPR010989 GO:0016020|GO:0016192
Vra9g1264 117 Gene3D - 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1264 Vra-Chr9 20200010 20200363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1264 4 116 SNARE and Associated Proteins AT1G08560 55.752 1.01e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1264 K08486 - vra:106773500 222.246