Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1256 ATGGCAACCCATCTGAATCATGTGTTCAGAACTTCAATTCTGAAGCACAAAACACAATCAGAGACCCTTTTGAGAACCTCACGAAGAAACCCAAGATTTGAAGTGATCAATGCAACAACATCTTCTCCCAGCAGTGCAAGGCAGCTCATAGAGTCTGGCATAGTGAGGTCTATATTGCCCAAAGATGCTTCCTCAGCAATAAACTCAGAGGGCTTTATTCTCCTTGATGTTAGGCCATATTGGGAGAGAGAGAAGGCACGTGTGGCAGGCTCTTTGCACGTGCCAATCTTTGTCGAAGATAAGGATAACAGCCCTATAACTTTACTTAAGAAGTGGGTGCATTTTGGGTACATTGGCTTGTGGACTGGCCAGTATCTCACTACTGTGAATTCTGAGTTCCTTATTCAAGTGGAAAAAGCTGTTCCTGGTAAGGACACAAAGCTTCTTGTGGCATGTGGAGAAGGATTGAGGTCAATGACAGCAGCTTCAAAACTGTATAATGGAGGTTACAAAAATCTGGGATGGTTGGCTGGTGGATTTAATCGTTCAAAGGACAATGACTTCCCATCAGCAGAAGGAAAAGAGAAGTTGCAGCATGCTACAATTGGGGGAGTTTCTTACATATTCCTTCAGTTGCTCATATTTCTAAAGGCTGTGGGATAA 663 0.4329 MATHLNHVFRTSILKHKTQSETLLRTSRRNPRFEVINATTSSPSSARQLIESGIVRSILPKDASSAINSEGFILLDVRPYWEREKARVAGSLHVPIFVEDKDNSPITLLKKWVHFGYIGLWTGQYLTTVNSEFLIQVEKAVPGKDTKLLVACGEGLRSMTAASKLYNGGYKNLGWLAGGFNRSKDNDFPSAEGKEKLQHATIGGVSYIFLQLLIFLKAVG* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1256 220 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 55 193 IPR036873 -
Vra9g1256 220 Pfam Rhodanese-like domain 60 182 IPR001763 -
Vra9g1256 220 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 220 IPR044614 -
Vra9g1256 220 CDD RHOD 62 181 - -
Vra9g1256 220 ProSiteProfiles Rhodanese domain profile. 68 192 IPR001763 -
Vra9g1256 220 Gene3D - 54 201 IPR036873 -
Vra9g1256 220 SMART rhod_4 58 189 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1256 Vra-Chr9 19987358 19988888 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1256 1 207 Sulfurtransferasese or Rhodanese AT3G08920 56.522 1.37e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1256 - - gmx:100795945 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g1256 9 19987358 19988888 Vra9g1256 9 19987358 19988888 ECH