Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1247 ATGGCAAAGCCAGAAAAACCGAAATCTGGGTGTTTTCCTGGCTTACTACGTGTGCTACTATGTGCTGGAAATGCAACTAGTCCTCCAGTGCACCCCTCTGATCATTTCACGGAATCAGATGACTCAGAAAAAGCACATTCCACCAAAGAAACCGTGGTGGTGAATGATGGTTCAACTCCTGGAGTGGTGGCAAGGTTAATGGGCTTGGATTCACTTCCAAACTCCAAATGGGCAATGAAAGGAGGGAGCCCAGATTCCGTTCCTAGAAGCAGGTCAGTGAACTTTGTGGATTACTTGCTTGAGTTTGATGCAAGCCATGCCATTCACAGAAGAGTGAAGACTTCATCATCGTTCAGAGAGGTTCCTGCTTTGTTTCAGAACCAAAAGGGTAATAATAACCTCTTTGTGCTTTGCATGGATGGTGACAAAGACGAAGAGGTGAGGAAATTGGAAATGGGTTTGGGAGAGGTGAGGAAGGTGAAGAGACAGGGGAGTAAGAACAAGGAGAGTGTGAGTGTGAAGAAAGAGAGGAATGTAGGTAAGAACAGGAAAATTTCAAAGCTGAAGAATGAGCCAAGGAGAGACCCTTCTTCTAAGCATGCTTCAAAGGGTCGAAATCTTGAAGGTAAAGATTTGTCTTCTGTGTCCTCAGGTTTCTCTAAGTGTAGTTCTTGTAGTAATAGACAAAATGGCGCTGGTTCAAGATCAAGCTCAAACACTTATTTGACAAAGAAGGGGCTTGTGCAAACAAAAGACAAGAGGAACATGAGAAACCAGAAGTTACTCTTGAAGGTTCAAAGTGAATGCAGCTTGGAAAATCGCAGTCCAGTTTCAGTTGCAGATAGCAATGACTATCCTTTCCTTTATGAAACAGATTTTCTAGATGGTTCAAACACCACGGGTTCAAAGTCAAAGAGGGTATCTCCATCAGTGTTGTCCTTGGATTGTGATGTTGAAGACAGTGCAAGTACTAATAAAGATTATACCTTCATAGATGTCAACAAGGAAGCAGAGTATCTCTCAGAAATGATGTTGCAGCTTCGTACTTTGACAGAACACGATGTAAGAGAGTCAGATTGTACCTTAAAACGTATGCGTGAGAGTGAAAGTTTTAGGGATATTTGTTTGGTGTTTGAGCATAAAATTTTCGACCATTTATTATATGAGGTCGTCAATGAATTTTCTGAACTTCGTTGTTGA 1200 0.4183 MAKPEKPKSGCFPGLLRVLLCAGNATSPPVHPSDHFTESDDSEKAHSTKETVVVNDGSTPGVVARLMGLDSLPNSKWAMKGGSPDSVPRSRSVNFVDYLLEFDASHAIHRRVKTSSSFREVPALFQNQKGNNNLFVLCMDGDKDEEVRKLEMGLGEVRKVKRQGSKNKESVSVKKERNVGKNRKISKLKNEPRRDPSSKHASKGRNLEGKDLSSVSSGFSKCSSCSNRQNGAGSRSSSNTYLTKKGLVQTKDKRNMRNQKLLLKVQSECSLENRSPVSVADSNDYPFLYETDFLDGSNTTGSKSKRVSPSVLSLDCDVEDSASTNKDYTFIDVNKEAEYLSEMMLQLRTLTEHDVRESDCTLKRMRESESFRDICLVFEHKIFDHLLYEVVNEFSELRC* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1247 399 MobiDBLite consensus disorder prediction 158 207 - -
Vra9g1247 399 MobiDBLite consensus disorder prediction 158 255 - -
Vra9g1247 399 MobiDBLite consensus disorder prediction 27 51 - -
Vra9g1247 399 MobiDBLite consensus disorder prediction 34 50 - -
Vra9g1247 399 MobiDBLite consensus disorder prediction 209 246 - -
Vra9g1247 399 PANTHER ALC-INTERACTING PROTEIN 1 1 397 - -
Vra9g1247 399 PANTHER OS05G0128300 PROTEIN 1 397 - -
Vra9g1247 399 Pfam DUF761-associated sequence motif 59 76 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1247 Vra-Chr9 19589025 19591074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1247 1 394 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 27.352 1.11e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1247 - - gmx:102668583 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g1247 9 19589025 19591074 Vra9g1247 9 19589025 19591074 ECH