Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1229 ATGGCACTGGAAGTGCTTGAAGCGCTTGATTCAGCGCGAACCCAATGGTACCATGTTACGGCCATCGTGATCGCTGGCATGGGGTTCTTCACCGACGCCTACGACCTTTTCTGTATTTCCACTGTTTCCAAACTTCTGGGACGATTGTACTACTTCGATCCTAGCTCCGACAAGCCGGGGAAGCTCCCAACATCAGTAAACAACTTCGTCATTGGTGTCGCCATTGTCGGAACCCTCTCCGGCCAGCTAGTCTTTGGCTGGCTCGGCGATAAACTCGGCCGGAAAAAGGTCTACGGAATCACCCTCATCCTCATGGTTCTCTGCGCCATTGCCTCCGGTCTCTCATTCGGTGCCAGCGCGAAATCCGTAATGGGAACACTGTGTTTCTTCCGCTTCTGGCTTGGCTTTGGTATCGGCGGCGACTACCCCCTATCCGCTACTATCATGTCGGAGTATGCCAACAAGAGGACACGAGGGGCGTTTATAGCTGCAGTGTTCGCCATGCAGGGCGTGGGAATCATCTTCGCGGGGCTTGTCTCCATGACACTCTCCGCGCTTTTCCAATCCTATTACCATGCTCCGACGTATACCCAAAACCGCGTCCTGTCCACGCGACCGGAGGCTGATCTTCTATGGCGGTTGGTTCTCATGATCGGTGCCATTCCGGCGTTGTTGACTTACTACTGGCGAATGAAGATGCCAGAAACGGGGCGTTACACTGCCATCATAGAAGGTAACGCAAAACAAGCTGCGGCGGATATGGCGAGAGTTTTGGACATTGAAATCCAAGCGGAGCAGGATAAGATTGCGGAGTTCAACGCAGCGAATAACTACCCTTTGTGGTCGAACGAGTTCTTTAACCGTCATGGGCGTCATTTGATCGGAACCATGAGCTCATGGTTTCTTCTTGACATCGCTTTTTACAGCCAGAATCTAACCCAGAAGGATATTTTCCCTGCCATCGGACTCATAGACAAAGATTTTAACATGAGCGCCATCGGTGAAGTGTTCCAGACGTCACGTGCCATGTTCGTGATCGCTCTGGTGGGGACCTTCCCCGGTTACTGGTTCACCGTCTTCTTCATCGAGAAGCTGGGGCGCTACAAGATCCAACTCGTTGGCTTCTTCATGATGTCATTTTTCATGTTTGTGATCGGTGTGAAGTACGATTACCTCAAGAACGAGAACAAGGGCCTCTTCGCCCTTCTCTACGGCTTGACGTTCTTCTTCGCAAACTTCGGACCCAACAGCACGACCTTCGTGCTTCCCGCGGAGCTGTTTCCAACGCGGGTGAGGAGCACGTGCCATGCGCTGAGTGCAGCGGCGGGGAAGGCTGGGGCACTGGTGGGGACATTCGGAATACAGAGCTTGACGGTGGGTGGTGACACGTACAAGATTAAGAAGGCGATGATTTTGCTGGCGGTGACTAACCTGTTAGGGTTCTTCTGCTCGTTCTTGGTTACTGAGACTAAGGGTAGATCGTTGGAGGAGATTTCCGGTGAGGATGGAAGAGAGAGTGAACTGACGGCAACGCCCAACGATTATAGGGTTCCGGTGTCAAGGACAGAGACCATGTGA 1578 0.5266 MALEVLEALDSARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPSSDKPGKLPTSVNNFVIGVAIVGTLSGQLVFGWLGDKLGRKKVYGITLILMVLCAIASGLSFGASAKSVMGTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMTLSALFQSYYHAPTYTQNRVLSTRPEADLLWRLVLMIGAIPALLTYYWRMKMPETGRYTAIIEGNAKQAAADMARVLDIEIQAEQDKIAEFNAANNYPLWSNEFFNRHGRHLIGTMSSWFLLDIAFYSQNLTQKDIFPAIGLIDKDFNMSAIGEVFQTSRAMFVIALVGTFPGYWFTVFFIEKLGRYKIQLVGFFMMSFFMFVIGVKYDYLKNENKGLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGALVGTFGIQSLTVGGDTYKIKKAMILLAVTNLLGFFCSFLVTETKGRSLEEISGEDGRESELTATPNDYRVPVSRTETM* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1229 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 492 IPR020846 GO:0022857
Vra9g1229 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 509 - -
Vra9g1229 525 CDD MFS_PhT 22 491 - -
Vra9g1229 525 Pfam Sugar (and other) transporter 22 499 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vra9g1229 525 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 2 509 - -
Vra9g1229 525 SUPERFAMILY MFS general substrate transporter 8 499 IPR036259 -
Vra9g1229 525 Gene3D MFS general substrate transporter like domains 17 514 IPR036259 -
Vra9g1229 525 MobiDBLite consensus disorder prediction 496 525 - -
Vra9g1229 525 TIGRFAM 2A0109: phosphate:H+ symporter 6 501 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1229 Vra-Chr9 19132492 19134072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1229 3 501 Inorganic Solute Cotransporters AT5G43350 63.158 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1229 K08176 - gmx:100805284 936.021